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S_p1_S3_coassembly_k141_2247558

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2247558_1
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

479..871
DNA (393bp) protein (131aa)
O-antigen ABC transporter, permease protein (Fragment) Tax=mine drainage metagenome RepID=T1CFR4_9ZZZZ
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
O-antigen ABC transporter permease
S_p1_S3_coassembly_k141_2247558_2
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

930..1484
DNA (555bp) protein (185aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EQB26423.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EQB26423.1};; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=Sporomusa ovata DSM 2662 RepID=T0JVW6_9FIRM
dTDP-4-dehydrorhamnose 3,5-epimerase
S_p1_S3_coassembly_k141_2247558_3
unknown

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comp(1645..2148)
DNA (504bp) protein (168aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI000377211F
S_p1_S3_coassembly_k141_2247558_4
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2201..3577)
DNA (1377bp) protein (459aa)
Peptidase bin=GWE2_Bacteroidetes_41_25 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
peptidase c14 caspase catalytic subunit p20
Tax=RBG_13_Bacteroidetes_43_22_curated
S_p1_S3_coassembly_k141_2247558_trna_1
unknown

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comp(4008..4080)
DNA (73bp)
transferRNA Val
S_p1_S3_coassembly_k141_2247558_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4581..4934)
DNA (354bp) protein (118aa)
hypothetical protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626374
Uncharacterized protein {ECO:0000313|EMBL:CDM64071.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
S_p1_S3_coassembly_k141_2247558_6
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5101..6552)
DNA (1452bp) protein (484aa)
Threonine synthase Tax=Thioflavicoccus mobilis 8321 RepID=L0GTL3_9GAMM
threonine synthase
Threonine synthase {ECO:0000313|EMBL:AGA90093.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
S_p1_S3_coassembly_k141_2247558_7
Aquifex aeolicus, Aquifex, Aquificales, Aquificae, Aquificae, Bacteria

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6698..7198
DNA (501bp) protein (167aa)
Transcriptional regulator (FurR family) Tax=Aquifex aeolicus (strain VF5) RepID=O67261_AQUAE
furR1; FUR family transcriptional regulator
Transcriptional regulator (FurR family) {ECO:0000313|EMBL:AAC07217.1}; species="Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex.;" source="Aquifex aeolicus (strain VF5).;"
S_p1_S3_coassembly_k141_2247558_8
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

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7251..7646
DNA (396bp) protein (132aa)
Response regulator receiver protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Trichodesmium erythraeum genus=Trichodesmium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
response regulator receiver protein
Tax=GWC2_Nitrospirae_42_7_curated
S_p1_S3_coassembly_k141_2247558_9
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(7829..8599)
DNA (771bp) protein (257aa)
imidazole glycerol phosphate synthase subunit hisF (EC:4.1.3.-)
imidazole glycerol phosphate synthase Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626B81
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_2247558_10
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8599..9312)
DNA (714bp) protein (238aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626701
Tax=S_Thermoanaerobacterales_50_218
S_p1_S3_coassembly_k141_2247558_11
Prevotella melaninogenica, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9494..10708
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=Prevotella melaninogenica D18 RepID=D3I4V3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFC73438.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella melaninogenica D18.;"
S_p1_S3_coassembly_k141_2247558_12
RLO_PLX_64_10, Bacteria

Not on your lists

comp(10727..11128)
DNA (402bp) protein (134aa)
endoribonuclease L-PSP Tax=Kribbella catacumbae RepID=UPI00038052C7
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S_p1_S3_coassembly_k141_2247558_13
unknown

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comp(11227..11991)
DNA (765bp) protein (255aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2247558_14
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(12065..13573)
DNA (1509bp) protein (503aa)
tRNA 2-methylthioadenosine synthase -like protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026263AC
putative tRNA modifying enzyme, MiaB-like
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_2247558_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14041..15114
DNA (1074bp) protein (358aa)
pdhA; Pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component, alpha subunit Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFX7_9BACT
Tax=GWC2_Gemmatimonadetes_71_10_curated
S_p1_S3_coassembly_k141_2247558_16
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

15225..16214
DNA (990bp) protein (330aa)
Pyruvate dehydrogenase, E1 component, beta subunit Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTS4_9BACT
Pyruvate dehydrogenase, E1 component, beta subunit {ECO:0000313|EMBL:EDM24945.1}; species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
pdhB2; pyruvate dehydrogenase, E1 component, beta subunit
S_p1_S3_coassembly_k141_2247558_17
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16387..17700
DNA (1314bp) protein (438aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Pyruvate dehydrogenase, dihydrolipoamide acetyltransferase (E2) component Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4Y1_AZOL4
pdhC; pyruvate dehydrogenase, dihydrolipoamide acetyltransferase (E2) component
S_p1_S3_coassembly_k141_2247558_18
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

17951..19885
DNA (1935bp) protein (645aa)
sulfatase Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI000262834F
hypothetical protein
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_2247558_19
unknown

Not on your lists

comp(20441..21901)
DNA (1461bp) protein (487aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2247558_20
Monosiga brevicollis, Monosiga, Choanoflagellida, Eukaryota

Not on your lists

22158..23132
DNA (975bp) protein (325aa)
PREDICTED: high affinity cGMP-specific 3'''',5''''-cyclic phosphodiesterase 9A Tax=Sorex araneus RepID=UPI0003315F0E
Predicted protein {ECO:0000313|EMBL:EDQ85016.1}; species="Eukaryota; Choanoflagellida; Codonosigidae; Monosiga.;" source="Monosiga brevicollis (Choanoflagellate).;"
S_p1_S3_coassembly_k141_2247558_21
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(23137..23751)
DNA (615bp) protein (205aa)
DEAD/DEAH box helicase Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI00028853DB
DEAD/DEAH box helicase domain protein
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_2247558_22
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23866..24873
DNA (1008bp) protein (336aa)
Heat shock protein DnaJ domain-containing protein Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HG91_9BACL
Heat shock protein DnaJ domain-containing protein {ECO:0000313|EMBL:EJY56754.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperidum URH17-3-68.;"
DnaJ domain-containing protein
S_p1_S3_coassembly_k141_2247558_23
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

25132..26037
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B8S8_TURPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM13685.1}; Flags: Precursor;; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H); (Leptospira parva).;"
Displaying 24 items

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