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S_p1_S3_coassembly_k141_2004723

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2004723_1
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..841)
DNA (840bp) protein (280aa)
Putative Sterol desaturase Tax=uncultured organism RepID=Q1EI10_9ZZZZ
fatty acid hydroxylase
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
S_p1_S3_coassembly_k141_2004723_2

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comp(838..1512)
DNA (675bp) protein (225aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL72080.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative transcription regulatory protein, ArsR family bin=GWF2_Lentisphaerae_57_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
ArsR family transcriptional regulator
S_p1_S3_coassembly_k141_2004723_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1661..4126)
DNA (2466bp) protein (822aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002EF2062
primosomal protein N'
S_p1_S3_coassembly_k141_2004723_4
unknown

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4349..5500
DNA (1152bp) protein (384aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2004723_5
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

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5804..6328
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=gamma proteobacterium HTCC2207 RepID=Q1YSA9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAS47297.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207.;"
DNA binding methylated-DNA-(protein)-cysteine S-methyltransferase
S_p1_S3_coassembly_k141_2004723_6
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6476..9187
DNA (2712bp) protein (904aa)
M1 family peptidase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U6C0_MYXSD
Peptidase M1 {ECO:0000313|EMBL:AKF79446.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
M1 family peptidase
S_p1_S3_coassembly_k141_2004723_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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9490..10155
DNA (666bp) protein (222aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI0003691171
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p1_S3_coassembly_k141_2004723_8
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(10412..11299)
DNA (888bp) protein (296aa)
6-phosphogluconate dehydrogenase Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B70AAE
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:KIE07033.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
Phosphogluconate dehydrogenase, NAD-binding protein
S_p1_S3_coassembly_k141_2004723_9
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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12137..12697
DNA (561bp) protein (187aa)
tyrosine recombinase XerC; K03733 integrase/recombinase XerC bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
recombinase XerD
Tax=CG_Syntroph_01
S_p1_S3_coassembly_k141_2004723_10
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12731..13264)
DNA (534bp) protein (178aa)
VanZ family protein Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U653_OCEP5
vanz family protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
S_p1_S3_coassembly_k141_2004723_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(13266..15836)
DNA (2571bp) protein (857aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Leucine--tRNA ligase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3Q6_SPHTD
leucyl-tRNA synthetase
S_p1_S3_coassembly_k141_2004723_12
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

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comp(15912..17474)
DNA (1563bp) protein (521aa)
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI000262728C
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_2004723_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(17897..19501)
DNA (1605bp) protein (535aa)
Hydantoin utilization protein B Tax=Advenella kashmirensis W13003 RepID=V8QX59_9BURK
hydantoinase B
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
S_p1_S3_coassembly_k141_2004723_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(19498..21606)
DNA (2109bp) protein (703aa)
hypothetical protein Tax=Cupriavidus sp. WS RepID=UPI00035E3A58
hydantoinase A
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
S_p1_S3_coassembly_k141_2004723_15
GWA2_Deltaproteobacteria_55_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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21893..22894
DNA (1002bp) protein (334aa)
Tax=GWA2_Deltaproteobacteria_55_10_curated
S_p1_S3_coassembly_k141_2004723_16
unknown

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comp(23178..23369)
DNA (192bp) protein (64aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2004723_17
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23431..23847)
DNA (417bp) protein (139aa)
NifU family SUF system FeS assembly protein Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289A703
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:KGW14308.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei MSHR4000.;"
NifU family SUF system FeS assembly protein
S_p1_S3_coassembly_k141_2004723_18
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23844..25067)
DNA (1224bp) protein (408aa)
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Cysteine desulfurase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZN4_RUBXD
S_p1_S3_coassembly_k141_2004723_19
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25074..26417)
DNA (1344bp) protein (448aa)
XshC-Cox1-family protein Tax=Methylomonas methanica (strain MC09) RepID=G0A6X0_METMM
XshC-Cox1-family protein
XshC-Cox1-family protein {ECO:0000313|EMBL:AEG00591.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
S_p1_S3_coassembly_k141_2004723_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26414..27046)
DNA (633bp) protein (211aa)
4-diphosphocytidyl-2C-methyl-D-erythritol synthase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SLF6_RHOMR
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000313|EMBL:AEN74673.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
S_p1_S3_coassembly_k141_2004723_21
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(27051..28016)
DNA (966bp) protein (322aa)
Xanthine dehydrogenase accessory factor, putative subfamily, putative Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L449_THERP
xanthine dehydrogenase accessory factor, putative subfamily, putative
Tax=RBG_16_Chloroflexi_63_12_curated
S_p1_S3_coassembly_k141_2004723_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28045..29208)
DNA (1164bp) protein (388aa)
VWA containing CoxE family protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SLF4_RHOMR
VWA containing CoxE family protein
VWA containing CoxE family protein {ECO:0000313|EMBL:AEN74671.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
S_p1_S3_coassembly_k141_2004723_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29233..30117)
DNA (885bp) protein (295aa)
ATPase associated with various cellular activities AAA_5 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SLF3_RHOMR
ATPase
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:AEN74670.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
S_p1_S3_coassembly_k141_2004723_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30114..30701)
DNA (588bp) protein (196aa)
Carbon monoxide dehydrogenase subunit G Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGS4_RHOM4
carbon monoxide dehydrogenase subunit G
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:ACY49637.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
S_p1_S3_coassembly_k141_2004723_25
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30860..33223)
DNA (2364bp) protein (788aa)
Carbon-monoxide dehydrogenase, large subunit Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q2Y5_9FIRM
Carbon-monoxide dehydrogenase, large subunit {ECO:0000313|EMBL:EKP95603.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
carbon monoxide dehydrogenase, large subunit
S_p1_S3_coassembly_k141_2004723_26
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(33227..33706)
DNA (480bp) protein (160aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI00036F9BCB
carbon-monoxide dehydrogenase
Tax=RBG_16_Chloroflexi_63_12_curated
S_p1_S3_coassembly_k141_2004723_27
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(33703..34581)
DNA (879bp) protein (293aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI00036A97BF
molybdopterin dehydrogenase FAD-binding protein
Tax=RBG_16_Chloroflexi_63_12_curated
S_p1_S3_coassembly_k141_2004723_28
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36109..37560)
DNA (1452bp) protein (484aa)
hypothetical protein Tax=Teredinibacter turnerae RepID=UPI00036FBE04
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ACR13562.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" source="Teredinibacter turnerae (strain ATCC 39867 / T7901).;"
S_p1_S3_coassembly_k141_2004723_29
unknown

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comp(37817..39193)
DNA (1377bp) protein (459aa)
hypothetical protein Tax=Nevskia ramosa RepID=UPI0003B4F1D8
S_p1_S3_coassembly_k141_2004723_30
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

40034..41383
DNA (1350bp) protein (450aa)
Uncharacterized protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U590_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIF22254.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
Displaying 30 items

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