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S_p1_S3_coassembly_k141_1581202_3

Organism: S_p1_S3_coassembly_Lambdaproteobacteria_69_214

partial RP 39 / 55 BSCG 39 / 51 ASCG 9 / 38 MC: 3
Location: 2066..2677

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 198.0
  • Bit_score: 137
  • Evalue 1.00e-29
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 205.0
  • Bit_score: 133
  • Evalue 5.50e-29
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 198.0
  • Bit_score: 137
  • Evalue 1.50e-29

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 612
TTGGACAAGGCAGCGCGCGATGACCCCTCGGCCGCGCTCGTGCGGCGGGCCAAGGCCGGCGACGCCGGGGCGTTCGACGACCTGCTGCGCCGCCACCACGGCGCCGTCCATCGGCTGGTCAACCGCATGCTGCGCAACGACGCAGATGCGCAGGAAATCACGCAAGAGACCTTTCTTTCCGCCTATCAGGGGCTGGCCGGCTTCGACGGGCGGGCCCGCTTCAACACCTGGCTGCTCGCCATCGCGTACAACAAGGCCATCGACCGGCTGAAGCGGCAGCGGCGCGACCCCTGGACGATCACCGGCGACCTCGACGAGTCGGAGCTGTGGCGCCGCTCGGCGAACGTGCACGGCTTTACGGACTGGGGGCTCACGCCGGAGCAGACTGTGCTGCGGAAGGAGCTGCGCGCCTTGCTCGACGATGCGCTGGCGCAGGTGCCCGCGCTGAACCGCGCGGTGTTCGAGCTGCGCGATATCCAGGGGTTGACGTCGCGGGAAGTGGCCGAGGCGCTCGCCCTCAGCGAGGGAGCGGTGCGCGTCCGGCTGCACCGCACGCGGCAGCTCCTGCTCGGCCGGCTGCGCGAGCGCCTGAACCCTGAGGAGGCCCGGTAG
PROTEIN sequence
Length: 204
LDKAARDDPSAALVRRAKAGDAGAFDDLLRRHHGAVHRLVNRMLRNDADAQEITQETFLSAYQGLAGFDGRARFNTWLLAIAYNKAIDRLKRQRRDPWTITGDLDESELWRRSANVHGFTDWGLTPEQTVLRKELRALLDDALAQVPALNRAVFELRDIQGLTSREVAEALALSEGAVRVRLHRTRQLLLGRLRERLNPEEAR*