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S_p1_S3_coassembly_k141_2417044_21

Organism: S_p1_S3_coassembly_Lambdaproteobacteria_69_214

partial RP 39 / 55 BSCG 39 / 51 ASCG 9 / 38 MC: 3
Location: comp(21839..22513)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LMZ1_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 195.0
  • Bit_score: 174
  • Evalue 6.40e-41
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 195.0
  • Bit_score: 174
  • Evalue 1.80e-41
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABK18793.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 195.0
  • Bit_score: 174
  • Evalue 9.00e-41

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Taxonomy

Syntrophobacter fumaroxidans → Syntrophobacter → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGCACCGCACCCTGGACCGCACGGCCGCCATCGACCCTGCCGGTGCGGCTCCGGGCAATGGCGAAACCGGTGGCGCAACCGATGGCGAGCTGGTGCGGCGCGCGCTGGCGGGGGAATCGCGCGCGTTCGAGGGGCTCGTGCGGCGCCACGGCCCGCGCGTGCAGCGCACGGTGCGGCGGCACGTGCCCGGCGATGCGGCGCAGGATGTGGTGCAGGAGGCGTTCTTGCGCGCCTACGTCTCGCTGGCGAACTACCGCGCAGCCGAGGGCGCGCTGGGCGACTGGCTGGTGACCCTGGCCGTGCGCGCCAGCTACGACCACTGGCGCGCCCGCTACCGCCGCCGCGAGGCGAGCGGCCCCCGCTTCGCGGAAAGCCACCAGGCCTGGGCCGAGCGGGTCACGCAGGCCCGCTCGGTCGAAGCCTTCGAGGAGGAGACGGCGCGCCGGGAGGCCCGGGAGGTGCTCCAGCTCGCCCTCGCCCGGCTGTCGCCCGAGGAGCGGCTCGTCGTGAGCCTGGTGCACCTCGAAGGGCTGAGCGTGGCCGAGGCCGCGCGGCAGCTCGGCTGGAGCGAGATCAACGTCAAGGTGCGGGCCCACCGCTCGCGCAGGAAGCTGCGCACGGTGCTGGAACCGCTGCTGGAACCGCTGCCGAACCGAACGCCGGAGGCGAAATGA
PROTEIN sequence
Length: 225
MHRTLDRTAAIDPAGAAPGNGETGGATDGELVRRALAGESRAFEGLVRRHGPRVQRTVRRHVPGDAAQDVVQEAFLRAYVSLANYRAAEGALGDWLVTLAVRASYDHWRARYRRREASGPRFAESHQAWAERVTQARSVEAFEEETARREAREVLQLALARLSPEERLVVSLVHLEGLSVAEAARQLGWSEINVKVRAHRSRRKLRTVLEPLLEPLPNRTPEAK*