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S_p1_S3_coassembly_k141_2417044

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2417044_1
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

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1..2115
DNA (2115bp) protein (705aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002E37299
secA; translocase binding subunit (ATPase)
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_2417044_2
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(2721..4097)
DNA (1377bp) protein (459aa)
Predicted protein Tax=Streptomyces sp. AA4 RepID=D9UWC1_9ACTO
hypothetical protein
Tax=CG_Anaero_02
S_p1_S3_coassembly_k141_2417044_3
R_RIF_OD1_13_52_23, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

4240..4515
DNA (276bp) protein (92aa)
hypothetical protein bin=bin1_lowGC species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_52_23_curated
S_p1_S3_coassembly_k141_2417044_4
unknown

Not on your lists

4632..4742
DNA (111bp) protein (37aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2417044_5
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4973..5776
DNA (804bp) protein (268aa)
Filamentous hemagglutinin family N-terminal domain protein Tax=Leptolyngbya sp. PCC 7375 RepID=K9F509_9CYAN
hypothetical protein
Filamentous hemagglutinin family N-terminal domain protein {ECO:0000313|EMBL:EKU96560.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
S_p1_S3_coassembly_k141_2417044_6
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

6092..6955
DNA (864bp) protein (288aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000287C21A
hypothetical protein
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_2417044_7
uncultured delta proteobacterium HF0200_39N20, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7298..8089
DNA (792bp) protein (264aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; species="Bacteria; Proteobacteria; Deltaproteobacteria; environmental samples.;" source="uncultured delta proteobacterium HF0200_39N20.;"
Probable inorganic polyphosphate/ATP-NAD kinase Tax=uncultured delta proteobacterium HF0200_39N20 RepID=E0XUT9_9DELT
ATP-NAD/AcoX kinase
S_p1_S3_coassembly_k141_2417044_8
Pelodictyon phaeoclathratiforme, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(8125..10809)
DNA (2685bp) protein (895aa)
Putative uncharacterized protein Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SH83_PELPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF43550.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1).;"
S_p1_S3_coassembly_k141_2417044_9
Pelodictyon luteolum, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(10820..11677)
DNA (858bp) protein (286aa)
Putative uncharacterized protein Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B3W5_PELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB23966.1}; Flags: Precursor;; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyon luteolum (strain DSM 273) (Chlorobium luteolum (strain DSM; 273)).;"
S_p1_S3_coassembly_k141_2417044_10
unknown

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comp(11846..12298)
DNA (453bp) protein (151aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2417044_11
unknown

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comp(12336..12911)
DNA (576bp) protein (192aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2417044_12
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14019..16094
DNA (2076bp) protein (692aa)
Translation elongation factor G Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LEB9_SYNFM
fusA; elongation factor G
Translation elongation factor G {ECO:0000313|EMBL:ABK15771.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
S_p1_S3_coassembly_k141_2417044_13
Pseudomonas phage MP1412, Caudovirales, Viruses

Not on your lists

16145..16678
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=Pseudomonas phage MP1412 RepID=I6WC65_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AFN39575.1}; species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Pseudomonas phage MP1412.;"
S_p1_S3_coassembly_k141_2417044_14
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16854..17642
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3VI72_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC83219.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
hypothetical protein
S_p1_S3_coassembly_k141_2417044_15
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17771..18775
DNA (1005bp) protein (335aa)
Fe-S osidoreductase Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026291EB
putative Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:AHI06000.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus W.;"
S_p1_S3_coassembly_k141_2417044_16
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

18766..19044
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1YW11_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCQ89840.1}; species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
TRASH domain-containing protein
S_p1_S3_coassembly_k141_2417044_17
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

19044..19943
DNA (900bp) protein (300aa)
UPF0103/Mediator of ErbB2-driven cell motility-containing protein Tax=Desulfococcus multivorans DSM 2059 RepID=S7TGH3_DESML
hypothetical protein
Tax=RBG_13_Spirochaetes_68_11_curated
S_p1_S3_coassembly_k141_2417044_18
RHI_RIF_OD1_10_43_12b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

20011..20847
DNA (837bp) protein (279aa)
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_10_43_12b_curated
S_p1_S3_coassembly_k141_2417044_19
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21041..21472)
DNA (432bp) protein (144aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1Y9J2_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX27236.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
S_p1_S3_coassembly_k141_2417044_20
unknown

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comp(21540..21842)
DNA (303bp) protein (101aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2417044_21
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21839..22513)
DNA (675bp) protein (225aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LMZ1_SYNFM
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABK18793.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
S_p1_S3_coassembly_k141_2417044_22
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(22600..23124)
DNA (525bp) protein (175aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S_p1_S3_coassembly_k141_2417044_23
unknown

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comp(23492..24214)
DNA (723bp) protein (241aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2417044_24
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24317..25141
DNA (825bp) protein (275aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI00030B6311
Spermine synthase {ECO:0000313|EMBL:KDB08570.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
spermine synthase
S_p1_S3_coassembly_k141_2417044_25
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

25370..26785
DNA (1416bp) protein (472aa)
Metal dependent phosphohydrolase Tax=Comamonas testosteroni KF-1 RepID=B7WR35_COMTE
phosphodiesterase
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_2417044_26
Tetraselmis sp. GSL018, Tetraselmis, Chlorodendrales, Chlorodendrophyceae, Chlorophyta, Viridiplantae

Not on your lists

26763..28169
DNA (1407bp) protein (469aa)
Glutathione synthetase {ECO:0000256|PIRNR:PIRNR001558}; Short=GSH-S {ECO:0000256|PIRNR:PIRNR001558};; EC=6.3.2.3 {ECO:0000256|PIRNR:PIRNR001558};; species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" source="Tetraselmis sp. GSL018.;"
glutathione synthase (EC:6.3.2.3)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002F6333A
S_p1_S3_coassembly_k141_2417044_27
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28448..30046
DNA (1599bp) protein (533aa)
LysM domain protein Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD99_9RHOB
LysM domain protein {ECO:0000313|EMBL:EAQ13485.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
peptidoglycan-binding LysM
S_p1_S3_coassembly_k141_2417044_28
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

30292..31491
DNA (1200bp) protein (400aa)
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
Displaying 28 items

View Taxonomy