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S_p1_S3_coassembly_k141_1959549

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1959549_1
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(246..839)
DNA (594bp) protein (198aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000365C2D0
Carbohydrate-Binding Module Family 2 candidate secreted modular protein with two N-terminal CBM2 domains
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
S_p1_S3_coassembly_k141_1959549_2
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(868..1722)
DNA (855bp) protein (285aa)
dimethyladenosine transferase
dimethyladenosine transferase bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
S_p1_S3_coassembly_k141_1959549_3
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(1724..2923)
DNA (1200bp) protein (400aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
membrane protein of unknown function
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
S_p1_S3_coassembly_k141_1959549_4
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(2988..3557)
DNA (570bp) protein (190aa)
SUA5/YciO/YrdC/YwlC family protein; K07566 putative translation factor bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
S_p1_S3_coassembly_k141_1959549_5
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists


comp(3554..5974)
DNA (2421bp) protein (807aa)
ssm:Spirs_0283 leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
leucyl-tRNA synthetase (EC:6.1.1.9 6.1.1.4)
Tax=CG_CPR12_01
S_p1_S3_coassembly_k141_1959549_6
CG_CPR14_01, CG_CPR14, Bacteria

Not on your lists

6077..7474
DNA (1398bp) protein (466aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
lipoprotein
Tax=CG_CPR14_01
S_p1_S3_coassembly_k141_1959549_7
CG_CPR14_01, CG_CPR14, Bacteria

Not on your lists

comp(7471..8985)
DNA (1515bp) protein (505aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EKW2_9BACT
Mg chelatase subunit ChlI
Tax=CG_CPR14_01
S_p1_S3_coassembly_k141_1959549_8
CG_CPR14_01, CG_CPR14, Bacteria

Not on your lists

comp(8975..9409)
DNA (435bp) protein (145aa)
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase (Prolipoprotein signalpeptidase) (Signal peptidase II) (SPase II) Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NTN5_9CORY bin=ACD43 species=Corynebacterium genitalium genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=CG_CPR14_01
S_p1_S3_coassembly_k141_1959549_9
CG_CPR14_01, CG_CPR14, Bacteria

Not on your lists

comp(9406..9771)
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1Z2K2_9BACT
conjugal transfer protein TraR
Tax=CG_CPR14_01
S_p1_S3_coassembly_k141_1959549_10
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(10183..11769)
DNA (1587bp) protein (529aa)
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
S_p1_S3_coassembly_k141_1959549_11
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(11875..14079)
DNA (2205bp) protein (735aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase Tax=uncultured bacterium RepID=K1Y851_9BACT
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
S_p1_S3_coassembly_k141_1959549_12
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(14197..14697)
DNA (501bp) protein (167aa)
hypothetical protein bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
S_p1_S3_coassembly_k141_1959549_13
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(14729..16804)
DNA (2076bp) protein (692aa)
hypothetical protein Tax=Dehalobacter sp. E1 RepID=UPI00030BC092
Fibronectin type III domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
S_p1_S3_coassembly_k141_1959549_14
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists


comp(16859..17263)
DNA (405bp) protein (135aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
30S ribosomal protein S15
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
S_p1_S3_coassembly_k141_1959549_15
CG_CPR14_01, CG_CPR14, Bacteria

Not on your lists

17405..18469
DNA (1065bp) protein (355aa)
Tyrosine recombinase XerD bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Tyrosine recombinase XerD
Tax=CG_CPR14_01
S_p1_S3_coassembly_k141_1959549_trna_1
unknown

Not on your lists

18580..18651
DNA (72bp)
transferRNA Arg
S_p1_S3_coassembly_k141_1959549_trna_2
unknown

Not on your lists

18791..18861
DNA (71bp)
transferRNA His
S_p1_S3_coassembly_k141_1959549_16
unknown

Not on your lists

comp(18957..19196)
DNA (240bp) protein (80aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1959549_17
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(19322..20056)
DNA (735bp) protein (245aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000375F917
Sodium/proton antiporter
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
S_p1_S3_coassembly_k141_1959549_18
RLO_OD1_Magasanikbacteria_43_12, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

20178..20510
DNA (333bp) protein (111aa)
Putative uncharacterized protein Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8S5_9ARCH bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Magasanikbacteria_43_12_curated
S_p1_S3_coassembly_k141_1959549_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

20643..21437
DNA (795bp) protein (265aa)
alias=16ft_combo_ws3_scaffold_775_30 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
S_p1_S3_coassembly_k141_1959549_20
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(21511..23034)
DNA (1524bp) protein (508aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
S_p1_S3_coassembly_k141_1959549_21
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(23302..23970)
DNA (669bp) protein (223aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037051FF
ATP-dependent Clp protease, proteolytic subunit ClpP
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
S_p1_S3_coassembly_k141_1959549_22
CG_CPR14_01, CG_CPR14, Bacteria

Not on your lists

comp(23985..24941)
DNA (957bp) protein (319aa)
MgpA protein; K06881 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
phosphoesterase RecJ
Tax=CG_CPR14_01
S_p1_S3_coassembly_k141_1959549_23
CG_CPR14_01, CG_CPR14, Bacteria

Not on your lists

comp(24981..27023)
DNA (2043bp) protein (681aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
infB; translation initiation factor IF-2
Tax=CG_CPR14_01
S_p1_S3_coassembly_k141_1959549_24
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(27200..27697)
DNA (498bp) protein (166aa)
Transcription elongation factor GreA Tax=uncultured bacterium RepID=K2A000_9BACT
greA; transcription elongation factor GreA
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
S_p1_S3_coassembly_k141_1959549_25
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(27789..28031)
DNA (243bp) protein (81aa)
excinuclease ABC subunit C domain-containing protein bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
S_p1_S3_coassembly_k141_1959549_26
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(28229..28948)
DNA (720bp) protein (240aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BC3_METBF
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
S_p1_S3_coassembly_k141_1959549_27
unknown

Not on your lists

comp(28962..29225)
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying 29 items

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