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S_p1_S3_coassembly_k141_283427

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_283427_1
unknown

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2..79
DNA (78bp) protein (26aa)

This feature has no annotations

S_p1_S3_coassembly_k141_283427_2
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(173..2737)
DNA (2565bp) protein (855aa)
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris formicicus Mc-S-70.;"
tRNA-splicing ligase RtcB Tax=Methanotorris formicicus Mc-S-70 RepID=H1KX77_9EURY
hypothetical protein
S_p1_S3_coassembly_k141_283427_3
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2768..3085)
DNA (318bp) protein (106aa)
RNA-splicing ligase RtcB Tax=Geobacter sp. (strain M18) RepID=E8WMM4_GEOS8
tRNA-splicing ligase
Tax=BJP_IG2069_Desfulfarculales_53_13
S_p1_S3_coassembly_k141_283427_4
unknown

Not on your lists

3209..4024
DNA (816bp) protein (272aa)

This feature has no annotations

S_p1_S3_coassembly_k141_283427_5
unknown

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4068..4424
DNA (357bp) protein (119aa)

This feature has no annotations

S_p1_S3_coassembly_k141_283427_6

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comp(4440..5012)
DNA (573bp) protein (191aa)
DNA-binding protein Tax=Pyrococcus RepID=Q8TZW3_PYRFU bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJF62970.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_283427_7
AR20, Woesearchaeaota, DPANN, Archaea

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comp(5015..5362)
DNA (348bp) protein (116aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E07C5
hypothetical protein
Tax=AR20
S_p1_S3_coassembly_k141_283427_8

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comp(5359..5652)
DNA (294bp) protein (98aa)
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; species="Archaea.;" source="archaeon GW2011_AR18.;"
50S ribosomal protein L21e
S_p1_S3_coassembly_k141_283427_9
unknown

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comp(5731..6249)
DNA (519bp) protein (173aa)

This feature has no annotations

S_p1_S3_coassembly_k141_283427_10
unknown

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comp(6251..6568)
DNA (318bp) protein (106aa)

This feature has no annotations

S_p1_S3_coassembly_k141_283427_11

Not on your lists

comp(6573..6851)
DNA (279bp) protein (93aa)
hypothetical protein
id=5103695 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62973.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_283427_12
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(6874..8535)
DNA (1662bp) protein (554aa)
Histone acetyltransferase Elp3 like protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Histone acetyltransferase Elp3 like protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_283427_13

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8631..9173
DNA (543bp) protein (181aa)
divalent cation transporter Tax=Methanobrevibacter smithii RepID=UPI00035E15FE
Marine sediment metagenome DNA, contig: S01H4_L04093 {ECO:0000313|EMBL:GAG81697.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
mgtE-like divalent cation transporter
S_p1_S3_coassembly_k141_283427_14
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

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9170..9853
DNA (684bp) protein (228aa)
Divalent cation transporter mgtE family Tax=Methanobrevibacter sp. AbM4 RepID=R9SNJ4_9EURY
divalent cation transporter mgtE family
Tax=RBG_16_OP11_39_9b_curated
S_p1_S3_coassembly_k141_283427_15
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

9891..11036
DNA (1146bp) protein (382aa)
Saccharopine dehydrogenase Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HS96_CYAP4
saccharopine dehydrogenase
Tax=CG_Pacearch_03
S_p1_S3_coassembly_k141_283427_16
unknown

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11345..11488
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 16 items

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