ggKbase home page

S_p1_S3_coassembly_k141_1325574

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1325574_1
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(3..548)
DNA (546bp) protein (182aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037322E7
hypothetical protein
Tax=RBG_13_WOR_2_41_10_curated
S_p1_S3_coassembly_k141_1325574_2
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(719..994)
DNA (276bp) protein (92aa)
Putative uncharacterized protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
transcriptional regulator
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1325574_3
unknown

Not on your lists

comp(967..1638)
DNA (672bp) protein (224aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1325574_4
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(1934..2497)
DNA (564bp) protein (188aa)
erpA; iron-sulfur cluster insertion protein erpA bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Iron-sulfur cluster assembly accessory protein
Tax=AR5
S_p1_S3_coassembly_k141_1325574_5
unknown

Not on your lists

comp(2528..2854)
DNA (327bp) protein (109aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1325574_6
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2894..3664)
DNA (771bp) protein (257aa)
DNA polymerase sliding clamp Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGT4_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase sliding clamp
Tax=AR20
S_p1_S3_coassembly_k141_1325574_7
unknown

Not on your lists

comp(3703..4110)
DNA (408bp) protein (136aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1325574_8

Not on your lists

comp(4154..4474)
DNA (321bp) protein (107aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C5AE9
Marine sediment metagenome DNA, contig: S12H4_L00950 {ECO:0000313|EMBL:GAI82646.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Transcription-associated protein TFIIS
S_p1_S3_coassembly_k141_1325574_9

Not on your lists

comp(4458..5024)
DNA (567bp) protein (189aa)
hypothetical protein
id=5103328 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62609.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_1325574_10

Not on your lists

comp(5027..5299)
DNA (273bp) protein (91aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; species="Archaea.;" source="archaeon GW2011_AR15.;"
DNA-directed RNA polymerase subunit L bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit L
S_p1_S3_coassembly_k141_1325574_11

Not on your lists


5355..6134
DNA (780bp) protein (260aa)
16S rRNA (Adenine1518-N6/adenine1519-N6)-dimethyltransferase {ECO:0000313|EMBL:KHO52195.1}; EC=2.1.1.182 {ECO:0000313|EMBL:KHO52195.1};; species="Archaea.;" source="archaeon GW2011_AR17.;"
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RSMA_METBU
S_p1_S3_coassembly_k141_1325574_12
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(6135..6374)
DNA (240bp) protein (80aa)
Putative uncharacterized protein Tax=Methanotorris formicicus Mc-S-70 RepID=H1KWU9_9EURY
hypothetical protein
Tax=CG_Pacearch_06
S_p1_S3_coassembly_k141_1325574_13

Not on your lists

comp(6405..6851)
DNA (447bp) protein (149aa)
Putative transcription factor, MBF1 like protein Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HQL5_ACIS0 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62602.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_1325574_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6905..7552
DNA (648bp) protein (216aa)
Glycosyltransferase Tax=nanoarchaeote Nst1 RepID=R1FTU0_9ARCH
hypothetical protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1325574_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(7553..8236)
DNA (684bp) protein (228aa)
Thioredoxin-like fold bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1325574_16
unknown

Not on your lists

8406..8621
DNA (216bp) protein (72aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1325574_17
unknown

Not on your lists

8755..9177
DNA (423bp) protein (141aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1325574_18
unknown

Not on your lists

comp(9134..9469)
DNA (336bp) protein (112aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1325574_19
unknown

Not on your lists

comp(9573..10304)
DNA (732bp) protein (244aa)

This feature has no annotations

Displaying 19 items

View Taxonomy