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S_p1_S3_coassembly_k141_1940258

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1940258_1

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comp(195..1325)
DNA (1131bp) protein (377aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI0003806686
Extracellular ligand-binding receptor {ECO:0000313|EMBL:KKP41993.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_33_14.;"
ABC transporter substrate-binding protein
S_p1_S3_coassembly_k141_1940258_2

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1565..2311
DNA (747bp) protein (249aa)
transcriptional regulator TrmB bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO45243.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
transcriptional regulator TrmB
S_p1_S3_coassembly_k141_1940258_3

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2382..2888
DNA (507bp) protein (169aa)
hypothetical protein
id=5103621 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62902.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_1940258_4
CG_Woesearch_02, Woesearchaeota, Archaea

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2872..3279
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Thermoanaerobacter RepID=D7AN06_THEM3 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1940258_5
AR20, Woesearchaeaota, DPANN, Archaea

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comp(3319..5937)
DNA (2619bp) protein (873aa)
Peptide chain release factor subunit 1 Tax=Thermococcus RepID=RF1_THEON bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Peptide chain release factor subunit 1
Tax=AR20
S_p1_S3_coassembly_k141_1940258_6
AR18, Woesearchaeaota, DPANN, Archaea

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comp(5954..8335)
DNA (2382bp) protein (794aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Valine-tRNA ligase
Tax=AR18
S_p1_S3_coassembly_k141_1940258_trna_1
unknown

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8417..8501
DNA (85bp)
transferRNA Phe
S_p1_S3_coassembly_k141_1940258_7

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8546..9085
DNA (540bp) protein (180aa)
id=5044957 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54557.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
S_p1_S3_coassembly_k141_1940258_8

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comp(9086..9703)
DNA (618bp) protein (206aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; Undecaprenyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; species="Archaea.;" source="archaeon GW2011_AR3.;"
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
S_p1_S3_coassembly_k141_1940258_9
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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9881..10303
DNA (423bp) protein (141aa)
30S ribosomal protein S19e Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RF64_METVM
30S ribosomal protein S19e
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7); (Methanococcus vulcanius).;"
S_p1_S3_coassembly_k141_1940258_10
AR20, Woesearchaeaota, DPANN, Archaea

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10305..10580
DNA (276bp) protein (92aa)
hypothetical protein
id=5103298 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S_p1_S3_coassembly_k141_1940258_11
CG_Woesearch_03, Woesearchaeota, Archaea

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10582..10758
DNA (177bp) protein (59aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C1FE9
hypothetical protein
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_1940258_12
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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10758..11198
DNA (441bp) protein (147aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036450B6
Ribosomal protein L31e
Putative uncharacterized protein {ECO:0000313|EMBL:EAY19367.1}; species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
S_p1_S3_coassembly_k141_1940258_13
AR20, Woesearchaeaota, DPANN, Archaea

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11223..12191
DNA (969bp) protein (323aa)
Probable tRNA pseudouridine synthase B Tax=Thermococcaceae RepID=TRUB_PYRFU bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative tRNA pseudouridine synthase B
Tax=AR20
S_p1_S3_coassembly_k141_1940258_14
unknown

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12230..12490
DNA (261bp) protein (87aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1940258_15

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comp(12483..14465)
DNA (1983bp) protein (661aa)
Putative ATPase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61486.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
S_p1_S3_coassembly_k141_1940258_16
unknown

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14576..14671
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 17 items

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