ggKbase home page

S_p1_S3_coassembly_k141_1144760

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1144760_1
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(123..833)
DNA (711bp) protein (237aa)
Cob(II)yrinic acid a,c-diamide reductase Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLS7_9ARCH
Cob(II)yrinic acid a,c-diamide reductase {ECO:0000313|EMBL:EGG41661.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
cob(II)yrinic acid a,c-diamide reductase
S_p1_S3_coassembly_k141_1144760_trna_1
unknown

Not on your lists

917..990
DNA (74bp)
transferRNA Val
S_p1_S3_coassembly_k141_1144760_2
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(997..1497)
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLS6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGG41660.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
hypothetical protein
S_p1_S3_coassembly_k141_1144760_3
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

1580..2077
DNA (498bp) protein (166aa)
Copper export protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUD9_9ARCH
Copper export protein {ECO:0000313|EMBL:EGP94573.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
hypothetical protein
S_p1_S3_coassembly_k141_1144760_4
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(2057..3082)
DNA (1026bp) protein (342aa)
RNA-3'-phosphate cyclase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUD8_9ARCH
RNA-3'-phosphate cyclase {ECO:0000313|EMBL:EGP94572.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
RNA-3'-phosphate cyclase
S_p1_S3_coassembly_k141_1144760_5
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

3148..3642
DNA (495bp) protein (165aa)
Nicotinamide-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00243}; EC=2.7.7.1 {ECO:0000256|HAMAP-Rule:MF_00243};; NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00243}; NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00243}; NMN adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00243}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
Nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase Tax=Candidatus Nitrosoarchaeum RepID=S2E6F4_9ARCH
S_p1_S3_coassembly_k141_1144760_6
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

3700..4830
DNA (1131bp) protein (377aa)
Serine--pyruvate transaminase Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLS2_9ARCH
Serine--pyruvate transaminase {ECO:0000313|EMBL:EGG41656.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
serine--pyruvate transaminase
S_p1_S3_coassembly_k141_1144760_7
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

4873..5622
DNA (750bp) protein (250aa)
Peptidyl-prolyl cis-trans isomerase Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KLS1_9ARCH
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
Peptidyl-prolyl cis-trans isomerase
S_p1_S3_coassembly_k141_1144760_8
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(5624..6667)
DNA (1044bp) protein (348aa)
Glycerol-1-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015263}; Short=G1P dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497};; Short=G1PDH {ECO:0000256|HAMAP-Rule:MF_00497};; EC=1.1.1.261 {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015268};; Enantiomeric glycerophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00497}; sn-glycerol-1-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
egsA; Glycerol-1-phosphate dehydrogenase [NAD(P)+] (EC:1.1.1.261)
Glycerol-1-phosphate dehydrogenase [NAD(P)+] Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUD4_9ARCH
S_p1_S3_coassembly_k141_1144760_9
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

6765..7397
DNA (633bp) protein (211aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {ECO:0000256|HAMAP-Rule:MF_02113}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
psmB; Proteasome subunit beta 2 (EC:3.4.25.1)
Proteasome subunit beta Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EQR3_9ARCH
S_p1_S3_coassembly_k141_1144760_10
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

7366..9342
DNA (1977bp) protein (659aa)
Beta-lactamase domain-containing protein Tax=Candidatus Nitrosoarchaeum RepID=F3KLR8_9ARCH
KH/beta-lactamase domain protein {ECO:0000313|EMBL:EPA06775.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
hypothetical protein
S_p1_S3_coassembly_k141_1144760_11
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(9334..9612)
DNA (279bp) protein (93aa)
DUF552 domain containing protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUD1_9ARCH
DUF552 domain containing protein {ECO:0000313|EMBL:EGP94565.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
hypothetical protein
S_p1_S3_coassembly_k141_1144760_12
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(9686..10693)
DNA (1008bp) protein (336aa)
Thiamine biosynthesis protein Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EX30_9ARCH
Thiamine biosynthesis protein {ECO:0000313|EMBL:EPA06749.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
S_p1_S3_coassembly_k141_1144760_13
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

10768..11832
DNA (1065bp) protein (355aa)
Peptidase M24 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A2U3_NITMS
Peptidase M24
Peptidase M24 {ECO:0000313|EMBL:AJM91394.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
S_p1_S3_coassembly_k141_1144760_14
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(11835..11945)
DNA (111bp) protein (37aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CZH3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGP94562.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
Displaying 15 items

View Taxonomy