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S_p1_S3_coassembly_k141_141684

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_141684_1
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

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1..615
DNA (615bp) protein (205aa)
Allergen V5/Tpx-1 family protein bin=GWA2_Elusimicrobia_66_18 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Allergen V5/Tpx-1 family protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
S_p1_S3_coassembly_k141_141684_2

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767..1642
DNA (876bp) protein (292aa)
Methionine aminopeptidase {ECO:0000256|RuleBase:RU003653}; EC=3.4.11.18 {ECO:0000256|RuleBase:RU003653};; species="Archaea.;" source="archaeon GW2011_AR20.;"
Methionine aminopeptidase Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=AMPM_ARCFU bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Methionine aminopeptidase
S_p1_S3_coassembly_k141_141684_3

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comp(1626..3917)
DNA (2292bp) protein (764aa)
AAA family ATPase, CDC48 subfamily Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4W9_METSW bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:AJF62478.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
AAA family ATPase, CDC48 subfamily
S_p1_S3_coassembly_k141_141684_4
AR18, Woesearchaeaota, DPANN, Archaea

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3976..4593
DNA (618bp) protein (206aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003669730
radB; DNA repair and recombination protein RadB
Tax=AR18
S_p1_S3_coassembly_k141_141684_5
GWC2_OP11_47_9_partial, Beckwithbacteria, Microgenomates, Bacteria

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4773..8537
DNA (3765bp) protein (1255aa)
Uncharacterized protein Tax=Rhizobium grahamii CCGE 502 RepID=S3HP60_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKU88040.1}; Flags: Fragment;; species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWC2_47_9.;"
hypothetical protein
S_p1_S3_coassembly_k141_141684_6

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8583..8747
DNA (165bp) protein (55aa)
Marine sediment metagenome DNA, contig: S01H4_L06665 {ECO:0000313|EMBL:GAG80693.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_141684_7
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(8699..12439)
DNA (3741bp) protein (1247aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5).;"
DNA topoisomerase 1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BCW5_METIK
DNA topoisomerase I
S_p1_S3_coassembly_k141_141684_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(12664..13284)
DNA (621bp) protein (207aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00038023B2
Metallophosphoesterase
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_141684_9

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comp(13281..13991)
DNA (711bp) protein (237aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; Undecaprenyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; species="Archaea.;" source="archaeon GW2011_AR20.;"
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6UPZ0_METVS bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
S_p1_S3_coassembly_k141_141684_10
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(14030..15394)
DNA (1365bp) protein (455aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036938B4
Serine-tRNA ligase
Tax=CG_Pacearch_05
S_p1_S3_coassembly_k141_141684_11
AR18, Woesearchaeaota, DPANN, Archaea

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15526..15747
DNA (222bp) protein (74aa)
regulatory protein MarR bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
S_p1_S3_coassembly_k141_141684_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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15822..16112
DNA (291bp) protein (97aa)
seg bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_141684_13

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comp(16100..16441)
DNA (342bp) protein (114aa)
Marine sediment metagenome DNA, contig: S01H1_S34967 {ECO:0000313|EMBL:GAG36196.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TOPRIM domain-containing protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Toprim protein
S_p1_S3_coassembly_k141_141684_14
AR20, Woesearchaeaota, DPANN, Archaea

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16523..17221
DNA (699bp) protein (233aa)
Putative uncharacterized protein Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK5_METMS bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
S_p1_S3_coassembly_k141_141684_15
unknown

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comp(17218..17433)
DNA (216bp) protein (72aa)

This feature has no annotations

S_p1_S3_coassembly_k141_141684_16
unknown

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comp(17616..17984)
DNA (369bp) protein (123aa)

This feature has no annotations

S_p1_S3_coassembly_k141_141684_17

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18198..18503
DNA (306bp) protein (102aa)
transcriptional regulator PadR family transcriptional regulator
transcriptional regulator PadR family transcriptional regulator bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Transcriptional regulator PadR family transcriptional regulator {ECO:0000313|EMBL:AJF60733.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_141684_18
unknown

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18537..18743
DNA (207bp) protein (69aa)

This feature has no annotations

S_p1_S3_coassembly_k141_141684_19
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(18744..19373)
DNA (630bp) protein (210aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003722246
integrase family protein
Tax=CG_Pacearch_03
Displaying 19 items

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