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S_p1_S3_coassembly_k141_317862

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_317862_1
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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comp(1..603)
DNA (603bp) protein (201aa)
Isoleucine--tRNA ligase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
isoleucyl-tRNA synthetase
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
S_p1_S3_coassembly_k141_317862_2
unknown

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656..1372
DNA (717bp) protein (239aa)

This feature has no annotations

S_p1_S3_coassembly_k141_317862_3
unknown

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comp(1360..1722)
DNA (363bp) protein (121aa)

This feature has no annotations

S_p1_S3_coassembly_k141_317862_4
Methanocaldococcus jannaschii, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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1843..4470
DNA (2628bp) protein (876aa)
Replication factor C small subunit Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RFCS_METJA
replication factor C small subunit
Replication factor C small subunit; Short=RFC small subunit;; Clamp loader small subunit; Contains:; Mja RFC-1 intein; Contains:; Mja RFC-2 intein; Contains:; Mja RFC-3 intein; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 /; JCM 10045 / NBRC 100440) (Methanococcus jannaschii).;"
S_p1_S3_coassembly_k141_317862_5
CG_Woesearch_02, Woesearchaeota, Archaea

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4472..5689
DNA (1218bp) protein (406aa)
replication factor C large subunit; K04800 replication factor C large subunit bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Replication factor C large subunit
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_317862_6

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5714..6466
DNA (753bp) protein (251aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO45755.1}; species="Archaea.;" source="archaeon GW2011_AR1.;"
zinc/iron permease bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
zinc/iron permease
S_p1_S3_coassembly_k141_317862_7

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6501..7337
DNA (837bp) protein (279aa)
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53659.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
S_p1_S3_coassembly_k141_317862_8
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7347..8948)
DNA (1602bp) protein (534aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
S_p1_S3_coassembly_k141_317862_9

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comp(9025..9423)
DNA (399bp) protein (133aa)
id=5049620 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53658.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
S_p1_S3_coassembly_k141_317862_10
AR20, Woesearchaeaota, DPANN, Archaea

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9618..10178
DNA (561bp) protein (187aa)
Membrane-associated phospholipid phosphatase Tax=[Eubacterium] cylindroides T2-87 RepID=D4JDV0_9FIRM bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Membrane-associated phospholipid phosphatase
Tax=AR20
S_p1_S3_coassembly_k141_317862_11
unknown

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comp(10446..10817)
DNA (372bp) protein (124aa)

This feature has no annotations

S_p1_S3_coassembly_k141_317862_12
AR18, Woesearchaeaota, DPANN, Archaea

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10921..12102
DNA (1182bp) protein (394aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037ED6A1
hypothetical protein
Tax=AR18
S_p1_S3_coassembly_k141_317862_13
unknown

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12105..12197
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 13 items

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