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S_p1_S3_coassembly_k141_477457

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_477457_1
CG_Micra_02, Micraarchaeota, Archaea

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comp(2..133)
DNA (132bp) protein (44aa)
Ycf68 bin=Nanosalina tax=Nanosalina
Tax=CG_Micra_02
S_p1_S3_coassembly_k141_477457_16S_1
unknown

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comp(4..1174)
DNA (1171bp)
16S ribosomal RNA (16S rRNA)
S_p1_S3_coassembly_k141_477457_2
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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comp(1454..2332)
DNA (879bp) protein (293aa)
thyX; FAD-dependent thymidylate synthase (EC:2.1.1.148)
Thymidylate synthase ThyX bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
S_p1_S3_coassembly_k141_477457_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(2439..2750)
DNA (312bp) protein (104aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_477457_4

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2840..3490
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW43182.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_56_13.;"
S_p1_S3_coassembly_k141_477457_5
R_OD1_56_20, Parcubacteria, Bacteria

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3558..3923
DNA (366bp) protein (122aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
S_p1_S3_coassembly_k141_477457_6
unknown

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comp(3981..4430)
DNA (450bp) protein (150aa)

This feature has no annotations

S_p1_S3_coassembly_k141_477457_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(4485..5615)
DNA (1131bp) protein (377aa)
PREDICTED: amidophosphoribosyltransferase, chloroplastic-like Tax=Pantholops hodgsonii RepID=UPI0003C1A094
purF; amidophosphoribosyltransferase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
S_p1_S3_coassembly_k141_477457_8

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comp(5617..6360)
DNA (744bp) protein (248aa)
sufC; putative ATP-dependent transporter SufC; K09013 Fe-S cluster assembly ATP-binding protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46101.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
sufC; putative ATP-dependent transporter SufC
S_p1_S3_coassembly_k141_477457_9
unknown

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comp(6362..6844)
DNA (483bp) protein (161aa)

This feature has no annotations

S_p1_S3_coassembly_k141_477457_10
AR11, Woesearchaeaota, DPANN, Archaea

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comp(6837..7229)
DNA (393bp) protein (131aa)
Fe-S cluster protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B646CA
NifU family SUF system FeS assembly protein
Tax=AR11
S_p1_S3_coassembly_k141_477457_11

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comp(7226..8437)
DNA (1212bp) protein (404aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506};; species="Archaea.;" source="archaeon GW2011_AR17.;"
csd; putative cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase Tax=Bacillus smithii 7_3_47FAA RepID=G9QH35_9BACI
S_p1_S3_coassembly_k141_477457_12

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comp(8434..9624)
DNA (1191bp) protein (397aa)
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Fe-S cluster assembly protein SufD {ECO:0000313|EMBL:KHO46104.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
FeS assembly protein SufD
S_p1_S3_coassembly_k141_477457_13

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comp(9637..11052)
DNA (1416bp) protein (472aa)
FeS assembly protein SufB Tax=Thermoanaerobacterium RepID=D9TMN1_THETC bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
FeS assembly protein SufB
FeS assembly protein SufB {ECO:0000313|EMBL:AJF62841.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_477457_14

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comp(11064..11441)
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52922.1}; species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein; K07108 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
S_p1_S3_coassembly_k141_477457_15
unknown

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comp(11516..12202)
DNA (687bp) protein (229aa)

This feature has no annotations

S_p1_S3_coassembly_k141_477457_16
unknown

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comp(12305..12442)
DNA (138bp) protein (46aa)

This feature has no annotations

S_p1_S3_coassembly_k141_477457_17
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(12480..13553)
DNA (1074bp) protein (358aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00038118B3
class V aminotransferase (NifS-like)
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_477457_18

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13606..14340
DNA (735bp) protein (245aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM84184.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_477457_19
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(14324..16171)
DNA (1848bp) protein (616aa)
hypothetical protein
id=5102982 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_477457_20
unknown

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comp(16205..16864)
DNA (660bp) protein (220aa)

This feature has no annotations

S_p1_S3_coassembly_k141_477457_21
AR20, Woesearchaeaota, DPANN, Archaea

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16952..18655
DNA (1704bp) protein (568aa)
Threonine--tRNA ligase Tax=Clostridium thermocellum RepID=SYT_CLOTH bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Threonine-tRNA ligase
Tax=AR20
S_p1_S3_coassembly_k141_477457_22
unknown

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18655..19131
DNA (477bp) protein (159aa)

This feature has no annotations

Displaying 23 items

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