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S_p1_S3_coassembly_k141_1373414

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1373414_1

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3..584
DNA (582bp) protein (194aa)
group 1 glycosyl transferase bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Group 1 glycosyl transferase {ECO:0000313|EMBL:KHO54051.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
glycosyl transferase, group 1
S_p1_S3_coassembly_k141_1373414_2

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597..1448
DNA (852bp) protein (284aa)
Marine sediment metagenome DNA, contig: S03H2_L00713 {ECO:0000313|EMBL:GAH41212.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Glycosyl transferase, group 2 family domain protein bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
family 2 glycosyl transferase
S_p1_S3_coassembly_k141_1373414_3
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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1450..2874
DNA (1425bp) protein (475aa)
anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase elongator protein (EC:1.14.13.81) bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
Fe-S oxidoreductase {ECO:0000313|EMBL:GAN34981.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
Radical SAM domain-containing protein
S_p1_S3_coassembly_k141_1373414_4
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

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comp(2877..3287)
DNA (411bp) protein (137aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
S_p1_S3_coassembly_k141_1373414_5

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comp(3380..4267)
DNA (888bp) protein (296aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; species="Archaea.;" source="archaeon GW2011_AR9.;"
Protease HtpX homolog Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ57_RUBXD bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protease HtpX-like protein
S_p1_S3_coassembly_k141_1373414_6
unknown

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comp(4269..4553)
DNA (285bp) protein (95aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1373414_7
AR9, Woesearchaeaota, DPANN, Archaea

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comp(4554..5108)
DNA (555bp) protein (185aa)
LemA family protein Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D774_METSW bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LemA family protein
Tax=AR9
S_p1_S3_coassembly_k141_1373414_8
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

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5183..5821
DNA (639bp) protein (213aa)
hypothetical protein; K03975 membrane-associated protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
S_p1_S3_coassembly_k141_1373414_9
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(5932..7020)
DNA (1089bp) protein (363aa)
transmembrane_regions 11..33 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKR16860.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
S_p1_S3_coassembly_k141_1373414_10
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7245..8153
DNA (909bp) protein (303aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037913DD
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
S_p1_S3_coassembly_k141_1373414_11
CG_Elusi_05, Elusimicrobia, Bacteria

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8150..9532
DNA (1383bp) protein (461aa)
radical SAM protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Fe-S oxidoreductase
Tax=CG_Elusi_05
S_p1_S3_coassembly_k141_1373414_12
unknown

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9556..9900
DNA (345bp) protein (115aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1373414_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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9900..10049
DNA (150bp) protein (50aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037238D5
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_1373414_14
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

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comp(10066..11529)
DNA (1464bp) protein (488aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376477D
radical SAM domain-containing protein
Tax=RIFOXYC2_FULL_RIF01_39_67_curated
S_p1_S3_coassembly_k141_1373414_15

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11626..12630
DNA (1005bp) protein (335aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003693E69
Glycosyl transferase family 4
Glycosyl transferase family 4 {ECO:0000313|EMBL:AJF62708.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_1373414_16

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12627..13892
DNA (1266bp) protein (422aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C1213
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AJF62707.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_1373414_17

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13861..14619
DNA (759bp) protein (253aa)
glycosyl transferase family 2 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Glycosyl transferase family 2 {ECO:0000313|EMBL:KHO53197.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
Glycosyl transferase family 2
S_p1_S3_coassembly_k141_1373414_18
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

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14616..15689
DNA (1074bp) protein (358aa)
glycosyltransferase bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
glycosyltransferase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
S_p1_S3_coassembly_k141_1373414_19
unknown

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15735..15869
DNA (135bp) protein (45aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1373414_20
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(15866..17020)
DNA (1155bp) protein (385aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B81CA
hypothetical protein
Tax=CG_Pacearch_06
Displaying 20 items

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