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S_p1_S3_coassembly_k141_1836227

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1836227_1
unknown

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comp(2..349)
DNA (348bp) protein (116aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1836227_2
unknown

Not on your lists

comp(402..1250)
DNA (849bp) protein (283aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1836227_3

Not on your lists

comp(1247..1699)
DNA (453bp) protein (151aa)
Marine sediment metagenome DNA, contig: S06H3_L07831 {ECO:0000313|EMBL:GAI24006.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_1836227_4
unknown

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comp(1662..2135)
DNA (474bp) protein (158aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1836227_5
unknown

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comp(2122..3951)
DNA (1830bp) protein (610aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1836227_6

Not on your lists

comp(3941..4336)
DNA (396bp) protein (132aa)
Putative uncharacterized protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45843.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p1_S3_coassembly_k141_1836227_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

4514..5047
DNA (534bp) protein (178aa)
Putative uncharacterized protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1836227_8
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

5132..5578
DNA (447bp) protein (149aa)
Putative uncharacterized protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Pacearch_03
S_p1_S3_coassembly_k141_1836227_9

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5621..5860
DNA (240bp) protein (80aa)
Marine sediment metagenome DNA, contig: S01H1_S07545 {ECO:0000313|EMBL:GAG13108.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_1836227_10
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5851..8922
DNA (3072bp) protein (1024aa)
Cell surface protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468N8_METBF
cell surface protein
Cell surface protein {ECO:0000313|EMBL:KKH99432.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
S_p1_S3_coassembly_k141_1836227_11
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

8873..9451
DNA (579bp) protein (193aa)
Putative uncharacterized protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Pacearch_03
S_p1_S3_coassembly_k141_1836227_12
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9457..10152)
DNA (696bp) protein (232aa)
hypothetical protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
S_p1_S3_coassembly_k141_1836227_13
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10142..10885)
DNA (744bp) protein (248aa)
RecA-superfamily ATPases implicated in signal transduction Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5P0_METCZ
RecA-superfamily ATPases implicated in signal transduction
RecA-superfamily ATPases implicated in signal transduction {ECO:0000313|EMBL:AFC99359.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
S_p1_S3_coassembly_k141_1836227_14
unknown

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comp(10926..11498)
DNA (573bp) protein (191aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1836227_15
unknown

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11608..11850
DNA (243bp) protein (81aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1836227_16
AR13, Pacearchaeaota, DPANN, Archaea

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11896..12369
DNA (474bp) protein (158aa)
30S ribosomal protein S13 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13
Tax=AR13
S_p1_S3_coassembly_k141_1836227_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


12371..12946
DNA (576bp) protein (192aa)
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S4P
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_1836227_18

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12943..13341
DNA (399bp) protein (133aa)
Marine sediment metagenome DNA, contig: S01H4_S05167 {ECO:0000313|EMBL:GAH02536.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S11 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S11
S_p1_S3_coassembly_k141_1836227_19
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13338..13748)
DNA (411bp) protein (137aa)
Transcriptional regulator, AraC family Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VTV9_THESW
AraC family transcriptional regulator
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:EXG87156.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
S_p1_S3_coassembly_k141_1836227_20
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

13799..14569
DNA (771bp) protein (257aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit D
Tax=AR18
S_p1_S3_coassembly_k141_1836227_21

Not on your lists

comp(14589..14927)
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50079.1}; species="Archaea.;" source="archaeon GW2011_AR9.;"
Transcription regulator AbrB/SpoV, predicted bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
S_p1_S3_coassembly_k141_1836227_22
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14924..15166)
DNA (243bp) protein (81aa)
id=5041829 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
S_p1_S3_coassembly_k141_1836227_23
unknown

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comp(15265..15657)
DNA (393bp) protein (131aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1836227_24
unknown

Not on your lists

15933..16352
DNA (420bp) protein (140aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1836227_25
AR20, Woesearchaeaota, DPANN, Archaea

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16402..16764
DNA (363bp) protein (121aa)
50S ribosomal protein L18e Tax=Staphylothermus RepID=A3DMQ7_STAMF bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L18e
Tax=AR20
S_p1_S3_coassembly_k141_1836227_26

Not on your lists


16766..17182
DNA (417bp) protein (139aa)
50S ribosomal protein L13P Tax=Thermococcus RepID=RL13_PYRKO bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L13P
50S ribosomal protein L13P {ECO:0000313|EMBL:AJF62958.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_1836227_27
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


17175..17573
DNA (399bp) protein (133aa)
30S ribosomal protein S9 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363BEDB
30S ribosomal protein S9
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_1836227_28
unknown

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17530..18564
DNA (1035bp) protein (345aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1836227_29
unknown

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comp(18501..18674)
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 29 items

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