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S_p1_S3_coassembly_k141_2012050

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2012050_trna_1
unknown

Not on your lists

228..302
DNA (75bp)
transferRNA Glu
S_p1_S3_coassembly_k141_2012050_1
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(318..2669)
DNA (2352bp) protein (784aa)
adg:Adeg_0493 ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
lon; ATP-dependent protease La (EC:3.4.21.53)
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
S_p1_S3_coassembly_k141_2012050_2
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2722..3438)
DNA (717bp) protein (239aa)
Methyltransferase type 11 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CUA9_METMJ
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ABN56959.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1).;"
S_p1_S3_coassembly_k141_2012050_3
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

3557..4534
DNA (978bp) protein (326aa)
Mg2 transporter protein CorA family protein; K03284 metal ion transporter, MIT family bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Mg2 transporter protein CorA family protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_2012050_4
GWB1_OP11_37_8, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(4531..5082)
DNA (552bp) protein (184aa)
micrococcal nuclease (EC:3.1.31.1); K01174 micrococcal nuclease [EC:3.1.31.1] bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
nuclease (EC:3.1.31.1)
Micrococcal nuclease {ECO:0000313|EMBL:KKQ42363.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_37_8.;"
S_p1_S3_coassembly_k141_2012050_5
RHI_Legionellales_35_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5145..5357
DNA (213bp) protein (71aa)
Tax=RIFCSPHIGHO2_12_FULL_Legionellales_35_11_curated
S_p1_S3_coassembly_k141_2012050_6
R_OP11_Levybacteria_37_33, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(5408..5779)
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2C0C5_9BACT
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_37_33_curated
S_p1_S3_coassembly_k141_2012050_trna_2
unknown

Not on your lists

comp(6004..6074)
DNA (71bp)
transferRNA Gln
S_p1_S3_coassembly_k141_2012050_7
GWB1_OP11_47_19, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(6358..6549)
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU67496.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWB1_47_19.;"
id=5085342 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
S_p1_S3_coassembly_k141_2012050_8

Not on your lists

6654..7103
DNA (450bp) protein (150aa)
hypothetical protein bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD65410.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
S_p1_S3_coassembly_k141_2012050_9
GWA2_OP11_var_37_36, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(7213..7464)
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ32113.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA2_37_36.;"
hypothetical protein
hypothetical protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S_p1_S3_coassembly_k141_2012050_10
RBG_13_OP11_Gottesmanbacteria_45_10_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

7545..8225
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZEZ0_SHEVD
hypothetical protein
Tax=RBG_13_OP11_Gottesmanbacteria_45_10_curated
S_p1_S3_coassembly_k141_2012050_11
R_OP11_Levybacteria_36_8b, Levybacteria, Microgenomates, Bacteria

Not on your lists

8354..8851
DNA (498bp) protein (166aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00036A95CD
Tax=RIFCSPLOWO2_02_FULL_OP11_Levybacteria_36_8b_curated
S_p1_S3_coassembly_k141_2012050_12
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(8840..9208)
DNA (369bp) protein (123aa)
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107] bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
diacylglycerol kinase
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
S_p1_S3_coassembly_k141_2012050_13
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(9212..9811)
DNA (600bp) protein (200aa)
PAP2 family protein Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z8A9_DEHE1
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_2012050_14
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(9815..11053)
DNA (1239bp) protein (413aa)
det:DET1365 gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
glutamyl-tRNA synthetase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_2012050_15
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

11130..12164
DNA (1035bp) protein (345aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2B7L7_9BACT
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_2012050_16
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(12139..13116)
DNA (978bp) protein (326aa)
D-alanyl-D-alanine carboxypeptidase-like protein Tax=uncultured bacterium RepID=K2ASC4_9BACT
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
S_p1_S3_coassembly_k141_2012050_17
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(13073..14407)
DNA (1335bp) protein (445aa)
amt:Amet_3390 aspartyl-tRNA synthetase (EC:6.1.1.12); K09759 nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
aspS1; aspartate--tRNA(Asp/Asn) ligase (EC:6.1.1.23)
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_2012050_18
R_OP11_Levybacteria_40_15b, Levybacteria, Microgenomates, Bacteria

Not on your lists

14576..14827
DNA (252bp) protein (84aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_15b_curated
S_p1_S3_coassembly_k141_2012050_19
GWB1_OP11_37_8, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(14824..16530)
DNA (1707bp) protein (569aa)
gmc:GY4MC1_0988 single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
Single-stranded-DNA-specific exonuclease {ECO:0000313|EMBL:KKQ42025.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_37_8.;"
recJ; single-stranded-DNA-specific exonuclease
S_p1_S3_coassembly_k141_2012050_20
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

16534..17955
DNA (1422bp) protein (474aa)
tde:TDE1033 polyA polymerase family protein; K00970 poly(A) polymerase [EC:2.7.7.19] bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
S_p1_S3_coassembly_k141_2012050_21
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

17963..18886
DNA (924bp) protein (308aa)
ABC transporter ATP-binding protein (EC:3.6.3.-); K01990 ABC-2 type transport system ATP-binding protein bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
ybhF_2; ABC-type multidrug transport system ATPase component
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_2012050_22
R_OP11_Levybacteria_38_21, Levybacteria, Microgenomates, Bacteria

Not on your lists

18846..19667
DNA (822bp) protein (274aa)
ABC-type multidrug transport system, permease component; K01992 ABC-2 type transport system permease protein bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
ABC transporter
Tax=RIFCSPLOWO2_01_FULL_OP11_Levybacteria_38_21_curated
S_p1_S3_coassembly_k141_2012050_23
GWC1_OD1_36_9, Parcubacteria, Bacteria

Not on your lists

19996..21144
DNA (1149bp) protein (383aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase Tax=Treponema denticola F0402 RepID=E9S303_TREDN
S-adenosylmethionine synthase {ECO:0000313|EMBL:KKQ18571.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_36_9.;"
S_p1_S3_coassembly_k141_2012050_24
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

21184..21648
DNA (465bp) protein (155aa)
Putative fusion protein (N:peptidase-C:desuccinylase) bin=GWC2_OD1_43_27 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
putative fusion protein (N:peptidase-C:desuccinylase)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_2012050_25
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

21651..22103
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2B8I7_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_2012050_26
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(22093..23001)
DNA (909bp) protein (303aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00036D4835
Protein translocase subunit SecF
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
S_p1_S3_coassembly_k141_2012050_27
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(23005..24297)
DNA (1293bp) protein (431aa)
Protein-export membrane protein SecD Tax=Selenomonas RepID=D4S7Z7_9FIRM bin=ACD50 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
S_p1_S3_coassembly_k141_2012050_28
R_OP11_Levybacteria_40_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(24294..24869)
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CXW3_9BACT
Transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_10_curated
Displaying items 1-30 of 50 in total

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