ggKbase home page

S_p1_S3_coassembly_k141_2083830

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2083830_1

Not on your lists

comp(3..911)
DNA (909bp) protein (303aa)
Probable tRNA pseudouridine synthase B Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BF51_METIK
Uncharacterized protein {ECO:0000313|EMBL:KHO45758.1}; species="Archaea.;" source="archaeon GW2011_AR1.;"
tRNA pseudouridine synthase B
S_p1_S3_coassembly_k141_2083830_2

Not on your lists

comp(908..1447)
DNA (540bp) protein (180aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527};; species="Archaea.;" source="archaeon GW2011_AR13.;"
hypothetical protein Tax=candidate division YNPFFA RepID=UPI00036BFF32
DNA-3-methyladenine glycosylase
S_p1_S3_coassembly_k141_2083830_3
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

1487..2098
DNA (612bp) protein (204aa)
Base excision DNA repair protein, HhH-GPD family Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IE81_ACIB4 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Base excision DNA repair protein, HhH-GPD family
Tax=RBG_16_Pacearchaeota_35_8_curated
S_p1_S3_coassembly_k141_2083830_4
R_RIF_OD1_09_50_13, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

2119..2622
DNA (504bp) protein (168aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_09_50_13_curated
S_p1_S3_coassembly_k141_2083830_5
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

2624..3133
DNA (510bp) protein (170aa)
Putative uncharacterized protein bin=GWC1_CPR2_39_9 species=Fibrobacter succinogenes genus=Fibrobacter taxon_order=Fibrobacterales taxon_class=Fibrobacteria phylum=Fibrobacteres tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
S_p1_S3_coassembly_k141_2083830_6

Not on your lists

3130..3768
DNA (639bp) protein (213aa)
N-glycosylase/DNA lyase (EC:4.2.99.18)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZLE7_9BACT
Probable N-glycosylase/DNA lyase {ECO:0000256|HAMAP-Rule:MF_00241}; species="Archaea.;" source="archaeon GW2011_AR19.;"
S_p1_S3_coassembly_k141_2083830_7
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(3773..4327)
DNA (555bp) protein (185aa)
Ribosomal protein L31e
Ribosomal protein L31e bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_16_Pacearchaeota_35_8_curated
S_p1_S3_coassembly_k141_2083830_8
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists


comp(4581..5000)
DNA (420bp) protein (140aa)
30S ribosomal protein S19e Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RG84_ARCPA
ribosomal protein S19e
Tax=CG_Pacearch_01
S_p1_S3_coassembly_k141_2083830_9

Not on your lists

comp(5099..5347)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK56317.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_2083830_10

Not on your lists

comp(5340..5750)
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK56318.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_2083830_11
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

5956..6522
DNA (567bp) protein (189aa)
Uncharacterized protein (Fragment) bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Pacearch_05
S_p1_S3_coassembly_k141_2083830_12
R_OD1_Kaiserbacteria_54_13, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

6624..7019
DNA (396bp) protein (132aa)
speH; S-adenosylmethionine decarboxylase SpeH (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FQC9_9DELT
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_13_curated
S_p1_S3_coassembly_k141_2083830_13
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7106..8503
DNA (1398bp) protein (466aa)
Saccharopine dehydrogenase Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDT1_DEFDS
saccharopine dehydrogenase
Tax=BJP_IG2158_Nitrospirales_45_240
Displaying 13 items

View Taxonomy