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S_p1_S3_coassembly_k141_387721

Search features with annotation key words

Displaying items 1-30 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_387721_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(2..643)
DNA (642bp) protein (214aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RI55_METP4
Tax=RBG_13_Bathyarchaeota_38_9_curated
S_p1_S3_coassembly_k141_387721_2

Not on your lists

comp(705..1514)
DNA (810bp) protein (270aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50909.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
DNA polymerase beta domain protein region (Fragment) bin=GWC2_Elusimicrobia_51_8 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
DNA polymerase beta protein
S_p1_S3_coassembly_k141_387721_3
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(1759..3660)
DNA (1902bp) protein (634aa)
Putative uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
AP endonuclease family enzyme
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_387721_4
unknown

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comp(3663..4265)
DNA (603bp) protein (201aa)

This feature has no annotations

S_p1_S3_coassembly_k141_387721_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4509..6005)
DNA (1497bp) protein (499aa)
Putative uncharacterized protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_387721_6
unknown

Not on your lists

comp(6040..6423)
DNA (384bp) protein (128aa)
PilT protein domain protein
S_p1_S3_coassembly_k141_387721_7
unknown

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comp(6420..6674)
DNA (255bp) protein (85aa)

This feature has no annotations

S_p1_S3_coassembly_k141_387721_8
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6683..6901)
DNA (219bp) protein (73aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000371B588
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ93488.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. (strain PRwf-1).;"
S_p1_S3_coassembly_k141_387721_9
R_PER_46_8, Bacteria

Not on your lists

comp(7346..8044)
DNA (699bp) protein (233aa)
cytochrome c biogenesis transmembrane protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cytochrome c biogenesis transmembrane protein
Tax=RIFCSPHIGHO2_01_FULL_PER_46_8_curated
S_p1_S3_coassembly_k141_387721_10
unknown

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comp(8046..8192)
DNA (147bp) protein (49aa)

This feature has no annotations

S_p1_S3_coassembly_k141_387721_11
AR18, Woesearchaeaota, DPANN, Archaea

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comp(8202..8726)
DNA (525bp) protein (175aa)
transmembrane_regions bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S_p1_S3_coassembly_k141_387721_12
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(8723..9508)
DNA (786bp) protein (262aa)
RNA-binding protein snRNP-like protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_387721_13
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(9511..9993)
DNA (483bp) protein (161aa)
seg bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_387721_14
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

10221..10976
DNA (756bp) protein (252aa)
Hit-like protein; K02503 Hit-like protein involved in cell-cycle regulation bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
histidine triad (HIT) protein
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_387721_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10973..11500
DNA (528bp) protein (176aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_387721_16
unknown

Not on your lists

comp(11626..13296)
DNA (1671bp) protein (557aa)

This feature has no annotations

S_p1_S3_coassembly_k141_387721_17
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(13496..14353)
DNA (858bp) protein (286aa)
Peptidase A24A prepilin type IV bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase A24A prepilin type IV
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_387721_18
unknown

Not on your lists

comp(14356..14703)
DNA (348bp) protein (116aa)

This feature has no annotations

S_p1_S3_coassembly_k141_387721_19
unknown

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comp(14707..14898)
DNA (192bp) protein (64aa)

This feature has no annotations

S_p1_S3_coassembly_k141_387721_20
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14999..15907
DNA (909bp) protein (303aa)
Uncharacterized protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZ74_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49995.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
S_p1_S3_coassembly_k141_387721_21
unknown

Not on your lists

16000..16140
DNA (141bp) protein (47aa)

This feature has no annotations

S_p1_S3_coassembly_k141_387721_22
unknown

Not on your lists

16145..16354
DNA (210bp) protein (70aa)

This feature has no annotations

S_p1_S3_coassembly_k141_387721_23

Not on your lists


16500..16826
DNA (327bp) protein (109aa)
50S ribosomal protein L7Ae {ECO:0000313|EMBL:KHO52667.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
50S ribosomal protein L7Ae bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rpl7ae; 50S ribosomal protein L7
S_p1_S3_coassembly_k141_387721_24
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


16831..17184
DNA (354bp) protein (118aa)
rps28e; 30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S28e
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
S_p1_S3_coassembly_k141_387721_25

Not on your lists

17237..17407
DNA (171bp) protein (57aa)
50S ribosomal protein L24e Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMF3_ACIS0
Large subunit ribosomal protein L24e {ECO:0000313|EMBL:KHO51367.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
ribosomal protein L24E
S_p1_S3_coassembly_k141_387721_26
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

17523..18095
DNA (573bp) protein (191aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000373C8AE
hypothetical protein
Tax=CG_Pacearch_04
S_p1_S3_coassembly_k141_387721_27
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

18097..20295
DNA (2199bp) protein (733aa)
fusA; elongation factor EF-2; K03234 elongation factor 2 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 2
Tax=RBG_16_Pacearchaeota_35_8_curated
S_p1_S3_coassembly_k141_387721_28
unknown

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20392..20757
DNA (366bp) protein (122aa)

This feature has no annotations

S_p1_S3_coassembly_k141_387721_29
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

20754..21257
DNA (504bp) protein (168aa)
Putative uncharacterized protein Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFM2_9EURY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEZ92832.1}; species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidiphilum ARMAN-4.;"
S_p1_S3_coassembly_k141_387721_30
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

21271..22038
DNA (768bp) protein (256aa)
aminotransferase class I/II Tax=Streptomyces chartreusis RepID=UPI000262D947
GGDEF and EAL domain-containing protein
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Displaying items 1-30 of 156 in total

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