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S_p1_S3_coassembly_k141_1174917

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1174917_1
AR20, Woesearchaeaota, DPANN, Archaea

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1..486
DNA (486bp) protein (162aa)
SCP-like extracellular Tax=Pseudanabaena biceps PCC 7429 RepID=L8N240_9CYAN bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SCP-like protein extracellular
Tax=AR20
S_p1_S3_coassembly_k141_1174917_2
unknown

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comp(1188..3605)
DNA (2418bp) protein (806aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1174917_3
unknown

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3769..6588
DNA (2820bp) protein (940aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1174917_4

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comp(6716..7096)
DNA (381bp) protein (127aa)
SSU ribosomal protein s8e; K02995 small subunit ribosomal protein S8e bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; species="Archaea.;" source="archaeon GW2011_AR3.;"
30S ribosomal protein S8e
S_p1_S3_coassembly_k141_1174917_5
unknown

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7266..7508
DNA (243bp) protein (81aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1174917_6
unknown

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7505..8674
DNA (1170bp) protein (390aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1174917_7
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(8689..10596)
DNA (1908bp) protein (636aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JY37_9FIRM
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1174917_8
unknown

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10653..11432
DNA (780bp) protein (260aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1174917_9
AR11, Woesearchaeaota, DPANN, Archaea

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11525..12136
DNA (612bp) protein (204aa)
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S19e
Tax=AR11
S_p1_S3_coassembly_k141_1174917_10

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12319..12864
DNA (546bp) protein (182aa)
Ribosomal protein L31e bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; species="Archaea.;" source="archaeon GW2011_AR15.;"
Ribosomal protein L31e
S_p1_S3_coassembly_k141_1174917_11
AR18, Woesearchaeaota, DPANN, Archaea

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12926..13666
DNA (741bp) protein (247aa)
id=5045274 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S_p1_S3_coassembly_k141_1174917_12

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13732..14724
DNA (993bp) protein (331aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_83_G03.;"
Probable tRNA pseudouridine synthase B bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative tRNA pseudouridine synthase B
S_p1_S3_coassembly_k141_1174917_13
unknown

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comp(14773..15177)
DNA (405bp) protein (135aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1174917_14

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15502..17325
DNA (1824bp) protein (608aa)
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53869.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
S_p1_S3_coassembly_k141_1174917_15
CG_Woesearch_01, Woesearchaeota, Archaea

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17322..19754
DNA (2433bp) protein (811aa)
mg-chelatase subunit chld bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
mg-chelatase subunit chld
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_1174917_16
CG_Woesearch_01, Woesearchaeota, Archaea

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19885..20367
DNA (483bp) protein (161aa)
id=5049535 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_1174917_17
AR18, Woesearchaeaota, DPANN, Archaea

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20367..21191
DNA (825bp) protein (275aa)
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S_p1_S3_coassembly_k141_1174917_18

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21245..22183
DNA (939bp) protein (313aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
MoxR-like protein ATPase {ECO:0000313|EMBL:KHO46450.1}; EC=3.6.3.- {ECO:0000313|EMBL:KHO46450.1};; species="Archaea.;" source="archaeon GW2011_AR3.;"
ATPase
S_p1_S3_coassembly_k141_1174917_19

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22260..23111
DNA (852bp) protein (284aa)
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53875.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
S_p1_S3_coassembly_k141_1174917_20
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23108..23653)
DNA (546bp) protein (182aa)
CDP-alcohol phosphatidyltransferase Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SZK9_META2
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:CCE24450.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
S_p1_S3_coassembly_k141_1174917_21
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(23650..24342)
DNA (693bp) protein (231aa)
seg bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_1174917_22
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(24339..24887)
DNA (549bp) protein (183aa)
id=5044931 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_1174917_23
AR18, Woesearchaeaota, DPANN, Archaea

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comp(24924..25253)
DNA (330bp) protein (110aa)
hypothetical protein; K09728 hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
S_p1_S3_coassembly_k141_1174917_24
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(25350..25589)
DNA (240bp) protein (80aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1174917_25
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(25592..26386)
DNA (795bp) protein (265aa)
Ribosomal RNA-processing protein RRP42 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
3' exoribonuclease
Tax=AR15
S_p1_S3_coassembly_k141_1174917_26
GWA2_OP11_46_7, Microgenomates, Bacteria

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comp(26361..27083)
DNA (723bp) protein (241aa)
Exosome complex exonuclease Rrp41 {ECO:0000313|EMBL:KKU44650.1}; species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_7.;"
Rph; exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
exosome complex exonuclease Rrp41
S_p1_S3_coassembly_k141_1174917_27

Not on your lists

comp(27085..27792)
DNA (708bp) protein (236aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; species="Archaea.;" source="archaeon GW2011_AR3.;"
putative exosome complex RNA-binding protein 1
S_p1_S3_coassembly_k141_1174917_28
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(27941..28642)
DNA (702bp) protein (234aa)
RNA-associated protein; K14574 ribosome maturation protein SDO1 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative RNA-associated protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1174917_29

Not on your lists

comp(28701..29441)
DNA (741bp) protein (247aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289};; 20S proteasome alpha subunit {ECO:0000256|HAMAP-Rule:MF_00289}; Proteasome core protein PsmA {ECO:0000256|HAMAP-Rule:MF_00289}; species="Archaea.;" source="archaeon GW2011_AR3.;"
Proteasome subunit alpha
S_p1_S3_coassembly_k141_1174917_30
unknown

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comp(29454..29648)
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying items 1-30 of 54 in total

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