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S_p2_S4_coassembly_k141_2643926

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2643926_1
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists

comp(102..884)
DNA (783bp) protein (261aa)
Uncharacterized protein bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
PAS/PAC sensor signal transduction histidine kinase
Tax=GWB2_Planctomycetes_41_19_curated
S_p2_S4_coassembly_k141_2643926_2
RIFOXYD12_FULL_Planctomycetes_42_12_curated, Planctomycetes, Bacteria

Not on your lists

comp(1098..2372)
DNA (1275bp) protein (425aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=planctomycete KSU-1 RepID=I3IH26_9PLAN
Tax=RIFOXYD12_FULL_Planctomycetes_42_12_curated
S_p2_S4_coassembly_k141_2643926_3
RifOxyB12_full_Planctomycetes_42_10_curated, Planctomycetes, Bacteria

Not on your lists

comp(2365..3165)
DNA (801bp) protein (267aa)
Release factor glutamine methyltransferase bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
HemK family modification methylase
Tax=RifOxyB12_full_Planctomycetes_42_10_curated
S_p2_S4_coassembly_k141_2643926_4
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

comp(3574..4665)
DNA (1092bp) protein (364aa)
Peptide chain release factor 1 Tax=planctomycete KSU-1 RepID=I3IH28_9PLAN
peptide chain release factor 1 (bRF-1)
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2643926_5
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists


comp(4662..4892)
DNA (231bp) protein (77aa)
50S ribosomal protein L31 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
50S ribosomal protein L31
Tax=GWB2_Planctomycetes_41_19_curated
S_p2_S4_coassembly_k141_2643926_6
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists


5110..6459
DNA (1350bp) protein (450aa)
Signal recognition particle protein bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
signal recognition particle protein
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2643926_7
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists


6526..6783
DNA (258bp) protein (86aa)
30S ribosomal protein S16 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
rpsP; 30S ribosomal protein S16
Tax=GWB2_Planctomycetes_41_19_curated
S_p2_S4_coassembly_k141_2643926_8
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

6832..7467
DNA (636bp) protein (212aa)
tRNA (guanine-N(1)-)-methyltransferase bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
trmD; tRNA (guanine-N(1)-)-methyltransferase
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2643926_9
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists


7516..7908
DNA (393bp) protein (131aa)
50S ribosomal protein L19 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
50S ribosomal protein L19
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2643926_10
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

8029..8484
DNA (456bp) protein (152aa)
UPF0102 protein KSU1_B0172 Tax=planctomycete KSU-1 RepID=I3IH34_9PLAN
hypothetical protein
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2643926_11
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists

8494..9864
DNA (1371bp) protein (457aa)
Deoxyribonuclease bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hydrolase TatD
Tax=GWB2_Planctomycetes_41_19_curated
S_p2_S4_coassembly_k141_2643926_12
RIFOXYD12_FULL_Planctomycetes_42_12_curated, Planctomycetes, Bacteria

Not on your lists

10181..10657
DNA (477bp) protein (159aa)
bifunctional argininosuccinate lyase/N-acetylglutamate synthase (EC:4.3.2.1 2.3.1.1)
Acetyltransferase Tax=planctomycete KSU-1 RepID=I3IH36_9PLAN
Tax=RIFOXYD12_FULL_Planctomycetes_42_12_curated
S_p2_S4_coassembly_k141_2643926_13
RIFOXYD12_FULL_Planctomycetes_42_12_curated, Planctomycetes, Bacteria

Not on your lists

10734..11774
DNA (1041bp) protein (347aa)
Na+-translocating NADH-quinone reductase subunit A Tax=planctomycete KSU-1 RepID=I3IH37_9PLAN
Na-translocating NADH-quinone reductase subunit A
Tax=RIFOXYD12_FULL_Planctomycetes_42_12_curated
S_p2_S4_coassembly_k141_2643926_14
RHI_Planctomycetes_42_15, Planctomycetes, Bacteria

Not on your lists

11771..12874
DNA (1104bp) protein (368aa)
Na+-translocating NADH-quinone reductase subunit B Tax=planctomycete KSU-1 RepID=I3IH38_9PLAN
RnfABCDGE type electron transport complex subunit D
Tax=RIFCSPHIGHO2_12_Planctomycetes_42_15_curated
S_p2_S4_coassembly_k141_2643926_15
RHI_Planctomycetes_42_15, Planctomycetes, Bacteria

Not on your lists

12888..13607
DNA (720bp) protein (240aa)
Na+-translocating NADH-quinone reductase subunit C bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
FMN-binding domain-containing protein
Tax=RIFCSPHIGHO2_12_Planctomycetes_42_15_curated
S_p2_S4_coassembly_k141_2643926_16
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13601..15016
DNA (1416bp) protein (472aa)
Na+-translocating NADH-quinone reductase subunit E Tax=planctomycete KSU-1 RepID=I3IH40_9PLAN
Na+-transporting NADH:ubiquinone oxidoreductase subunit E {ECO:0000313|EMBL:GAN33903.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD
S_p2_S4_coassembly_k141_2643926_17
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

15119..16747
DNA (1629bp) protein (543aa)
Na+-translocating NADH-quinone reductase subunit F bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Oxidoreductase FAD-binding domain-containing protein
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2643926_18
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

17231..17860
DNA (630bp) protein (210aa)
Uncharacterized protein Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W703_DESIS
hypothetical protein
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2643926_19
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

18117..18308
DNA (192bp) protein (64aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036142C1
hypothetical protein
Tax=RBG_16_Planctomycetes_41_13_curated
S_p2_S4_coassembly_k141_2643926_20
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18305..18484
DNA (180bp) protein (60aa)
YcfA family protein bin=GWC2_Syntrophobacterales_56_13 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
YcfA-like protein
YcfA-like protein {ECO:0000313|EMBL:AFM25856.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
S_p2_S4_coassembly_k141_2643926_21
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18603..19118)
DNA (516bp) protein (172aa)
Putative uncharacterized protein Tax=Methylobacter tundripaludum SV96 RepID=G3J2B1_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGW19867.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
S_p2_S4_coassembly_k141_2643926_22
unknown

Not on your lists

comp(19316..20059)
DNA (744bp) protein (248aa)
hypothetical protein
S_p2_S4_coassembly_k141_2643926_23
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20183..20410)
DNA (228bp) protein (76aa)
Putative uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=CG_Delta_05
S_p2_S4_coassembly_k141_2643926_24
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

20799..21512
DNA (714bp) protein (238aa)
ABC transporter ATP-binding component bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
ABC transporter related
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2643926_25
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

21544..22407
DNA (864bp) protein (288aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid transferase bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2643926_26
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists

comp(22404..22880)
DNA (477bp) protein (159aa)
lspA; Lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Tax=GWB2_Planctomycetes_41_19_curated
S_p2_S4_coassembly_k141_2643926_27
RIFOXYD12_FULL_Planctomycetes_42_12_curated, Planctomycetes, Bacteria

Not on your lists

comp(22890..23267)
DNA (378bp) protein (126aa)
Transcriptional regulator bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
DnaK suppressor protein
Tax=RIFOXYD12_FULL_Planctomycetes_42_12_curated
S_p2_S4_coassembly_k141_2643926_28
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(23595..23786)
DNA (192bp) protein (64aa)
Uncharacterized protein bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Tax=RBG_16_Planctomycetes_41_13_curated
S_p2_S4_coassembly_k141_2643926_29
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

24030..24845
DNA (816bp) protein (272aa)
Uncharacterized protein bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
TPR repeats containing protein
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2643926_30
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

comp(24842..25267)
DNA (426bp) protein (142aa)
Uncharacterized protein bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
Displaying items 1-30 of 42 in total

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