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S_p2_S4_coassembly_k141_2444077

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Displaying items 1-30 of 242 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2444077_1
CG_Micra_02, Micraarchaeota, Archaea

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1..1203
DNA (1203bp) protein (401aa)
mar:MAE_26780 lysyl-tRNA synthetase; K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
lysyl-tRNA synthetase, class I (EC:6.1.1.6)
Tax=CG_Micra_02
S_p2_S4_coassembly_k141_2444077_2
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists


1304..2491
DNA (1188bp) protein (396aa)
Translation initiation factor 2 subunit gamma Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DRS3_METV3
small GTP-binding protein
Tax=CG_Micra_06
S_p2_S4_coassembly_k141_2444077_3
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2496..3128
DNA (633bp) protein (211aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;"
Adenylate kinase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=KAD_THEYD
S_p2_S4_coassembly_k141_2444077_trna_1
unknown

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3149..3222
DNA (74bp)
transferRNA Lys
S_p2_S4_coassembly_k141_2444077_4
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3252..3602
DNA (351bp) protein (117aa)
Nucleotide-binding protein PInc Tax=Methanolobus psychrophilus R15 RepID=K4MCM3_9EURY
nucleotide-binding protein PInc
Nucleotide-binding protein PInc {ECO:0000313|EMBL:AFV23179.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrophilus R15.;"
S_p2_S4_coassembly_k141_2444077_5
CG_Micra_06, Micraarchaeota, Archaea

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3626..4168
DNA (543bp) protein (181aa)
DNA-directed RNA polymerase Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHS4_9EURY
DNA-directed RNA polymerase
Tax=CG_Micra_06
S_p2_S4_coassembly_k141_2444077_6
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4205..4357
DNA (153bp) protein (51aa)
UPI0003D1B86B related cluster Tax=unknown RepID=UPI0003D1B86B
DNA-directed RNA polymerase, subunit E'
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
S_p2_S4_coassembly_k141_2444077_7
unknown

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4364..4678
DNA (315bp) protein (105aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2444077_8
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

4795..5325
DNA (531bp) protein (177aa)
CAAX protease self-immunity
CAAX protease self-immunity bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Micra_04
S_p2_S4_coassembly_k141_2444077_9
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

5453..6142
DNA (690bp) protein (230aa)
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Sua5/YciO/YrdC/YwlC family protein
Tax=CG_Micra_02
S_p2_S4_coassembly_k141_2444077_10
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists


comp(6139..6984)
DNA (846bp) protein (282aa)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
metallohydrolase, glycoprotease/Kae1 family
Tax=CG_Micra_03
S_p2_S4_coassembly_k141_2444077_11
unknown

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comp(7137..7382)
DNA (246bp) protein (82aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2444077_12
unknown

Not on your lists

7422..7646
DNA (225bp) protein (75aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2444077_13
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

7671..8255
DNA (585bp) protein (195aa)
Mn2+dependent serine/threonine protein kinase Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EA34_METMS
Mn2+dependent serine/threonine protein kinase
Tax=CG_Micra_04
S_p2_S4_coassembly_k141_2444077_14
unknown

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comp(8629..9171)
DNA (543bp) protein (181aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2444077_15
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(9171..11210)
DNA (2040bp) protein (680aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
DEAD/DEAH box helicase domain protein
Tax=CG_Micra_03
S_p2_S4_coassembly_k141_2444077_16
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

11309..11818
DNA (510bp) protein (170aa)
UPF0218 protein Mfer_0440 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY58_METFV
hypothetical protein
UPF0218 protein Mfer_0440 {ECO:0000256|HAMAP-Rule:MF_00590}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
S_p2_S4_coassembly_k141_2444077_17
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

11815..12294
DNA (480bp) protein (160aa)
Nicotinamide-nucleotide adenylyltransferase Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DN25_STAMF
nicotinamide-nucleotide adenylyltransferase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
S_p2_S4_coassembly_k141_2444077_18
unknown

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12291..12773
DNA (483bp) protein (161aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2444077_19
unknown

Not on your lists

comp(12887..13123)
DNA (237bp) protein (79aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2444077_20
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(13171..13848)
DNA (678bp) protein (226aa)
2-haloalkanoic acid dehalogenase Tax=Thermococcus litoralis DSM 5473 RepID=H3ZLF1_THELI
2-haloalkanoic acid dehalogenase
Tax=CG_Aenigma_01
S_p2_S4_coassembly_k141_2444077_trna_9
unknown

Not on your lists

comp(13931..14003)
DNA (73bp)
transferRNA Gln
S_p2_S4_coassembly_k141_2444077_21
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

comp(14037..14510)
DNA (474bp) protein (158aa)
Tax=CG_Micra_06
S_p2_S4_coassembly_k141_2444077_22
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

comp(14504..15070)
DNA (567bp) protein (189aa)
UPF0290 protein GQS_07300 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HL05_THES4
hypothetical protein
Tax=CG_Micra_02
S_p2_S4_coassembly_k141_2444077_23
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

15075..15956
DNA (882bp) protein (294aa)
protease IV (EC:3.4.21.-)
signal peptide peptidase SppA, 36K type; K04773 protease IV [EC:3.4.21.-] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Micra_02
S_p2_S4_coassembly_k141_2444077_24
unknown

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16008..16148
DNA (141bp) protein (47aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2444077_25
unknown

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16241..16411
DNA (171bp) protein (57aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2444077_26
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

16435..16992
DNA (558bp) protein (186aa)
Tax=CG_Micra_06
S_p2_S4_coassembly_k141_2444077_27
unknown

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17016..17411
DNA (396bp) protein (132aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2444077_28
unknown

Not on your lists

17467..18072
DNA (606bp) protein (202aa)

This feature has no annotations

Displaying items 1-30 of 242 in total

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