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S_p2_S4_coassembly_k141_248465

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_248465_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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2..598
DNA (597bp) protein (199aa)
Methyl-accepting chemotaxis protein bin=GWC2_Geobacteraceae_55_20 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
methyl-accepting chemotaxis sensory transducer
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
S_p2_S4_coassembly_k141_248465_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

628..972
DNA (345bp) protein (115aa)
CheA signal transduction histidine kinase Tax=Geobacter sp. (strain M18) RepID=E8WLI7_GEOS8
CheA signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S_p2_S4_coassembly_k141_248465_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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985..5904
DNA (4920bp) protein (1640aa)
PAS/PAC sensor signal transduction histidine kinase Tax=Geobacter sp. (strain M18) RepID=E8WTF1_GEOS8
PAS/PAC sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p2_S4_coassembly_k141_248465_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5901..6302
DNA (402bp) protein (134aa)
Response regulator receiver protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D6V4_9BACT
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p2_S4_coassembly_k141_248465_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6318..6683
DNA (366bp) protein (122aa)
Response regulator receiver protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D6V6_9BACT
Response regulator receiver protein {ECO:0000313|EMBL:EDY17907.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
winged helix family two component transcriptional regulator
S_p2_S4_coassembly_k141_248465_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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6695..7111
DNA (417bp) protein (139aa)
Response regulator receiver protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D6V5_9BACT
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p2_S4_coassembly_k141_248465_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7243..7614
DNA (372bp) protein (124aa)
hypothetical protein Tax=Janthinobacterium sp. CG3 RepID=UPI00034A9379
Histidine kinase {ECO:0000313|EMBL:EDY17910.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Fis family NifA subfamily transcriptional regulator
S_p2_S4_coassembly_k141_248465_8
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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7720..10011
DNA (2292bp) protein (764aa)
CheA signal transduction histidine kinase bin=GWC2_Ignavibacteria_56_12 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
cheAY40H-2; sensor histidine kinase CheA and response receiver CheY associated with MCPs of class 40H
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
S_p2_S4_coassembly_k141_248465_9
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10204..10563
DNA (360bp) protein (120aa)
S23 ribosomal protein Tax=Moorea producens 3L RepID=F4XND4_9CYAN
S23 ribosomal protein
Tax=RBG_13_Deltaproteobacteria_58_19_curated
S_p2_S4_coassembly_k141_248465_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

10595..11665
DNA (1071bp) protein (357aa)
hypothetical protein Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037B3DAF
cheB40H-2; protein glutamate methylesterase CheB associated with MCPs of class 40H, response receiver domain-containing
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S_p2_S4_coassembly_k141_248465_11
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

11678..13657
DNA (1980bp) protein (660aa)
Histidine kinase (EC:2.7.13.3) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Histidine kinase (EC:2.7.13.3)
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
S_p2_S4_coassembly_k141_248465_12
R_NC10_66_22, NC10, Bacteria

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13743..14123
DNA (381bp) protein (127aa)
Response regulator receiver protein Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A9P0_STAND
response regulator receiver protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_248465_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

14402..14773
DNA (372bp) protein (124aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
two component, sigma54 specific, transcriptional regulator, Fis family
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_248465_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

14874..18014
DNA (3141bp) protein (1047aa)
Histidine kinase (EC:2.7.13.3) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Histidine kinase (EC:2.7.13.3)
Tax=CSP1_5_NC10
S_p2_S4_coassembly_k141_248465_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

18032..19045
DNA (1014bp) protein (338aa)
Two-component response regulator Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJX2_9BACT
hypothetical protein
Two-component response regulator {ECO:0000313|EMBL:CBE67555.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_248465_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19101..23261
DNA (4161bp) protein (1387aa)
Histidine kinase (EC:2.7.13.3)
Putative Histidine kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJX3_9BACT
Tax=RBG_16_Gamma2_65_34_curated
S_p2_S4_coassembly_k141_248465_17
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23258..23647
DNA (390bp) protein (130aa)
Two component transcriptional regulator, winged helix family Tax=Roseiflexus sp. (strain RS-1) RepID=A5US93_ROSS1
Histidine kinase {ECO:0000313|EMBL:KJS20916.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
two component transcriptional regulator
S_p2_S4_coassembly_k141_248465_18
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23644..24024
DNA (381bp) protein (127aa)
Response regulator receiver protein Tax=Pedosphaera parvula Ellin514 RepID=B9XIN4_9BACT bin=16ft_combo_ws3_JS1 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
S_p2_S4_coassembly_k141_248465_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

24027..24704
DNA (678bp) protein (226aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJX4_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_248465_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

24751..27066
DNA (2316bp) protein (772aa)
Type IV pilus assembly protein tapB bin=GWC2_Deltaproteobacteria_66_88 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
type II secretion system protein E
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S_p2_S4_coassembly_k141_248465_21
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27078..29138
DNA (2061bp) protein (687aa)
Two-component hybrid sensor and regulator Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LR3_SYMTH
two-component hybrid sensor and regulator
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAD41383.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
S_p2_S4_coassembly_k141_248465_22
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

29302..30243
DNA (942bp) protein (314aa)
Putative Peptidase, M23/M37 family Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKV4_9BACT
Peptidase, M23/M37 family
Putative Peptidase, M23/M37 family {ECO:0000313|EMBL:CBE67753.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_248465_23
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

30419..33283
DNA (2865bp) protein (955aa)
Protein translocase subunit SecA Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKV5_9BACT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
secA; preprotein translocase subunit SecA
S_p2_S4_coassembly_k141_248465_24
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

33665..34822
DNA (1158bp) protein (386aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML89_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67755.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 24 items

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