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S_p2_S4_coassembly_k141_474604

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_474604_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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281..496
DNA (216bp) protein (72aa)
Cold shock protein, DNA binding Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIA2_9BACT
cspA; Cold shock protein, DNA binding
Cold shock protein, DNA binding {ECO:0000313|EMBL:CBE67252.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_474604_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(695..1213)
DNA (519bp) protein (173aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
deoxycytidine triphosphate deaminase bin=bin1_lowGC species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
S_p2_S4_coassembly_k141_474604_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(1388..1954)
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIA3_9BACT
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67253.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_474604_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1992..2246)
DNA (255bp) protein (85aa)
Amino acid permease family protein Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LA04_ARALL
amino acid permease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
S_p2_S4_coassembly_k141_474604_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2349..3350)
DNA (1002bp) protein (334aa)
amino acid transporter bin=bin7_NC10_sister species=Streptomyces cattleya genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
amino acid transporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
S_p2_S4_coassembly_k141_474604_6
unknown

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comp(3388..3567)
DNA (180bp) protein (60aa)

This feature has no annotations

S_p2_S4_coassembly_k141_474604_7
CSP1_5_NC10, NC10, Bacteria

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3609..4604
DNA (996bp) protein (332aa)
putative hydrolase transmembrane protein bin=bin3_NC10 species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative hydrolase transmembrane protein
Tax=CSP1_5_NC10
S_p2_S4_coassembly_k141_474604_8
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4871..5782
DNA (912bp) protein (304aa)
Uncharacterized protein Tax=Azospirillum brasilense Sp245 RepID=G8ANK2_AZOBR
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCC98814.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
S_p2_S4_coassembly_k141_474604_9
R_NC10_66_22, NC10, Bacteria

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5879..6583
DNA (705bp) protein (235aa)
methyltransferase bin=bin7_NC10_sister species=Methanobacterium sp. MB1 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
methyltransferase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_474604_10
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

6638..7414
DNA (777bp) protein (259aa)
hypothetical protein; K03478 hypothetical protein bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RBG_16_NC10_65_8_curated
S_p2_S4_coassembly_k141_474604_11
R_NC10_66_22, NC10, Bacteria

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7433..8422
DNA (990bp) protein (330aa)
transcriptional repressor; K00845 glucokinase [EC:2.7.1.2] bin=bin7_NC10_sister species=Shinella zoogloeoides genus=Shinella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ROK family glucokinase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_474604_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8435..8725)
DNA (291bp) protein (97aa)
Bsr0127 protein bin=GWC2_Proteo_65_14_Ab886 species=Burkholderia sp. SJ98 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
GYD family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_474604_13
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

8889..10100
DNA (1212bp) protein (404aa)
Putative oxidoreductase bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
putative oxidoreductase
Tax=RBG_16_Caldithrix_48_16_curated
S_p2_S4_coassembly_k141_474604_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

10458..12710
DNA (2253bp) protein (751aa)
Glycosyl transferase, family 2 (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMA3_9BACT
glycosyl transferase, family 2
Glycosyl transferase, family 2 (Modular protein) {ECO:0000313|EMBL:CBE67989.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_474604_15
unknown

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13124..14320
DNA (1197bp) protein (399aa)

This feature has no annotations

S_p2_S4_coassembly_k141_474604_16
unknown

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14480..14665
DNA (186bp) protein (62aa)

This feature has no annotations

S_p2_S4_coassembly_k141_474604_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14719..15354
DNA (636bp) protein (212aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000366ED00
dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S_p2_S4_coassembly_k141_474604_18
unknown

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15507..16079
DNA (573bp) protein (191aa)

This feature has no annotations

S_p2_S4_coassembly_k141_474604_19
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16276..18675
DNA (2400bp) protein (800aa)
Uncharacterized protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PBD9_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF78947.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
S_p2_S4_coassembly_k141_474604_20
bacterium UASB270, Bacteria

Not on your lists

18852..19814
DNA (963bp) protein (321aa)
Glycosyl transferase Tax=Oscillatoria acuminata PCC 6304 RepID=K9TSN8_9CYAN
Glycosyl transferase family 2 {ECO:0000313|EMBL:GAK58831.1}; species="Bacteria.;" source="bacterium UASB270.;"
glycosyl transferase family protein
S_p2_S4_coassembly_k141_474604_21
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19807..20352
DNA (546bp) protein (182aa)
Methyltransferase type 11 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DKH7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF00119.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
S_p2_S4_coassembly_k141_474604_22
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20368..20985
DNA (618bp) protein (206aa)
Methyltransferase type 11 Tax=Desulfovibrio sp. X2 RepID=S7V622_9DELT
Methyltransferase type 11 {ECO:0000313|EMBL:EPR42104.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
type 11 methyltransferase
S_p2_S4_coassembly_k141_474604_23
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21409..21789
DNA (381bp) protein (127aa)
Methyltransferase family protein Tax=Leptolyngbya sp. PCC 7375 RepID=K9EXE1_9CYAN
Methyltransferase family protein {ECO:0000313|EMBL:EKV01775.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
type 11 methyltransferase
Displaying 23 items

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