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S_p2_S4_coassembly_k141_810973

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_810973_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(226..1401)
DNA (1176bp) protein (392aa)
major facilitator transporter bin=bin3_NC10 species=Desulfovibrio alkalitolerans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
major facilitator transporter
Tax=CSP1_5_NC10
S_p2_S4_coassembly_k141_810973_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1425..1823)
DNA (399bp) protein (133aa)
protein-methionine-S-oxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB bin=GWD2_Deltaproteobacteria_55_8 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_64_85_curated
S_p2_S4_coassembly_k141_810973_3
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1897..2550)
DNA (654bp) protein (218aa)
CMP/dCMP deaminase zinc-binding protein Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SY94_META2
CMP/dCMP deaminase zinc-binding protein
CMP/dCMP deaminase zinc-binding protein {ECO:0000313|EMBL:CCE25403.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
S_p2_S4_coassembly_k141_810973_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(2681..3229)
DNA (549bp) protein (183aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
S_p2_S4_coassembly_k141_810973_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists

3433..3888
DNA (456bp) protein (152aa)
hypothetical protein bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
S_p2_S4_coassembly_k141_810973_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4123..4692)
DNA (570bp) protein (190aa)
hypothetical protein VspiD_21265 bin=GWD2_Deltaproteobacteria_55_8 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Fatty acid hydroxylase superfamily
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
S_p2_S4_coassembly_k141_810973_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4707..4844)
DNA (138bp) protein (46aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIB5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S_p2_S4_coassembly_k141_810973_8
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(4944..5156)
DNA (213bp) protein (71aa)
cold shock protein CspA family protein bin=bin1_lowGC species=Enterococcus durans genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
cold-shock domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
S_p2_S4_coassembly_k141_810973_9
unknown

Not on your lists

comp(5403..5720)
DNA (318bp) protein (106aa)

This feature has no annotations

S_p2_S4_coassembly_k141_810973_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

5768..7087
DNA (1320bp) protein (440aa)
Putative ATP-dependent RNA helicase with P-loop hydrolase domain (RhlE gene) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJS0_9BACT
ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene)
Putative ATP-dependent RNA helicase with P-loop hydrolase domain (RhlE gene) {ECO:0000313|EMBL:CBE67503.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_810973_11
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7241..7876)
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Methylomonas methanica (strain MC09) RepID=F9ZX20_METMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF98481.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
S_p2_S4_coassembly_k141_810973_12
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7873..8316)
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Methylomonas methanica (strain MC09) RepID=F9ZX19_METMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF98480.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
S_p2_S4_coassembly_k141_810973_13
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8328..9008)
DNA (681bp) protein (227aa)
Curli production assembly/transport component CsgG Tax=Methylomicrobium RepID=G4SUR6_META2
Curli production protein CsgG
Curli production assembly/transport component CsgG {ECO:0000313|EMBL:CCE22893.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
S_p2_S4_coassembly_k141_810973_14
unknown

Not on your lists

comp(9093..10337)
DNA (1245bp) protein (415aa)

This feature has no annotations

S_p2_S4_coassembly_k141_810973_15
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10719..12344)
DNA (1626bp) protein (542aa)
Virginiamycin B lyase {ECO:0000256|HAMAP-Rule:MF_01282}; EC=4.2.99.- {ECO:0000256|HAMAP-Rule:MF_01282};; Streptogramin B lyase {ECO:0000256|HAMAP-Rule:MF_01282}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI000379A857
hypothetical protein
S_p2_S4_coassembly_k141_810973_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12922..13128
DNA (207bp) protein (69aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Pseudanabaena biceps genus=Pseudanabaena taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
S_p2_S4_coassembly_k141_810973_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

13136..13444
DNA (309bp) protein (103aa)
hypothetical protein bin=bin5_DeltaP species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_810973_18
unknown

Not on your lists

13722..14069
DNA (348bp) protein (116aa)

This feature has no annotations

S_p2_S4_coassembly_k141_810973_19
unknown

Not on your lists

comp(14445..15104)
DNA (660bp) protein (220aa)

This feature has no annotations

S_p2_S4_coassembly_k141_810973_20
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

comp(15108..16262)
DNA (1155bp) protein (385aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4C5_GEOUR
hypothetical protein
Tax=CG_Elusi_02
S_p2_S4_coassembly_k141_810973_21
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(16941..17129)
DNA (189bp) protein (63aa)
dnaE; error-prone DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170, ECO:0000313|EMBL:CBE68352.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Error-prone DNA polymerase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF23_9BACT
S_p2_S4_coassembly_k141_810973_22
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17172..17456)
DNA (285bp) protein (95aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Calothrix sp. PCC 7507 genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
S_p2_S4_coassembly_k141_810973_23
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17453..17722)
DNA (270bp) protein (90aa)
hypothetical protein Tax=Calothrix sp. PCC 7103 RepID=UPI0002E0D20A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY60223.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
S_p2_S4_coassembly_k141_810973_24
unknown

Not on your lists

17814..18095
DNA (282bp) protein (94aa)
hypothetical protein
S_p2_S4_coassembly_k141_810973_25
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(18124..19245)
DNA (1122bp) protein (374aa)
Aldo/keto reductase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLV0_9BACT
Aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:CBE70007.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_810973_26
CSP1_5_NC10, NC10, Bacteria

Not on your lists

19404..20009
DNA (606bp) protein (202aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
S_p2_S4_coassembly_k141_810973_27
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(20000..20590)
DNA (591bp) protein (197aa)
Putative Adenylate cyclase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLV1_9BACT
Adenylate cyclase
Putative Adenylate cyclase {ECO:0000313|EMBL:CBE70008.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_810973_28
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(20594..20776)
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLV2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70009.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_810973_29
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(20937..22727)
DNA (1791bp) protein (597aa)
pckG; phosphoenolpyruvate carboxykinase [GTP] (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000313|EMBL:CBE70011.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Phosphoenolpyruvate carboxykinase [GTP] Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLV4_9BACT
S_p2_S4_coassembly_k141_810973_30
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(22916..23746)
DNA (831bp) protein (277aa)
Transcriptional regulator, TetR family bin=GWC2_Methylomirabilis_70_16 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional regulator
Tax=GWC2_Rokubacteria_70_16_curated
Displaying items 1-30 of 43 in total

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