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S_p2_S4_coassembly_k141_2073741

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2073741_1
unknown

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1..132
DNA (132bp) protein (44aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2073741_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(786..1451)
DNA (666bp) protein (222aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFJ6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68527.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2073741_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(1598..1960)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN59_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70201.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2073741_4
CSP1_5_NC10, NC10, Bacteria

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2357..2890
DNA (534bp) protein (178aa)
putative transcriptional regulator bin=bin3_NC10 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative transcriptional regulator
Tax=CSP1_5_NC10
S_p2_S4_coassembly_k141_2073741_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3080..3559)
DNA (480bp) protein (160aa)
id=14431051 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
S_p2_S4_coassembly_k141_2073741_6
CSP1_5_NC10, NC10, Bacteria

Not on your lists

4024..5115
DNA (1092bp) protein (364aa)
poly(R)-hydroxyalkanoic acid synthase subunit PhaC; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] bin=bin3_NC10 species=Aneurinibacillus aneurinilyticus genus=Aneurinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit
Tax=CSP1_5_NC10
S_p2_S4_coassembly_k141_2073741_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

5174..5701
DNA (528bp) protein (176aa)
hypothetical protein bin=bin3_NC10 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
S_p2_S4_coassembly_k141_2073741_8
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5876..6226
DNA (351bp) protein (117aa)
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
S_p2_S4_coassembly_k141_2073741_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6421..7164)
DNA (744bp) protein (248aa)
3-oxoacyl-(acyl-carrier-protein) reductase bin=bin7_NC10_sister species=Phascolarctobacterium succinatutens genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
fabG; 3-ketoacyl-ACP reductase
Tax=CSP1_6_Rokubacteria
S_p2_S4_coassembly_k141_2073741_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7706..8248
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN60_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70202.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2073741_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8349..8894)
DNA (546bp) protein (182aa)
id=2114318 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
S_p2_S4_coassembly_k141_2073741_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(8909..9904)
DNA (996bp) protein (332aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN61_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70203.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2073741_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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10097..11125
DNA (1029bp) protein (343aa)
Rod shape-determining protein mreB Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN62_9BACT
mreB; Rod shape-determining protein mreB
Rod shape-determining protein mreB {ECO:0000313|EMBL:CBE70204.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2073741_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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11271..12059
DNA (789bp) protein (263aa)
Cell shape-determining protein MreC Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN63_9BACT
Rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2073741_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

12056..12538
DNA (483bp) protein (161aa)
Putative Rod shape-determining protein MreD Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN64_9BACT
Rod shape-determining protein MreD
Putative Rod shape-determining protein MreD {ECO:0000313|EMBL:CBE70206.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2073741_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

12535..14376
DNA (1842bp) protein (614aa)
Penicillin-binding protein 2 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN65_9BACT
mrdA; penicillin-binding protein 2
Penicillin-binding protein 2 {ECO:0000313|EMBL:CBE70207.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2073741_17
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

14392..15492
DNA (1101bp) protein (367aa)
Rod shape-determining protein rodA Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN66_9BACT
mrdB; Rod shape-determining protein rodA
Rod shape-determining protein rodA {ECO:0000313|EMBL:CBE70208.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2073741_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

15594..18410
DNA (2817bp) protein (939aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
ileS; isoleucine tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN67_9BACT
S_p2_S4_coassembly_k141_2073741_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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18519..19007
DNA (489bp) protein (163aa)
lspA; Lipoprotein signal peptidase (Prolipoprotein signal peptidase) (SPase II) (Signal peptidase II) (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Lipoprotein signal peptidase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN68_9BACT
S_p2_S4_coassembly_k141_2073741_20
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

19004..19981
DNA (978bp) protein (326aa)
rluD; pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Pseudouridine synthase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN69_9BACT
S_p2_S4_coassembly_k141_2073741_21
R_NC10_66_22, NC10, Bacteria

Not on your lists

20440..22131
DNA (1692bp) protein (564aa)
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZ01_ANATU
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_2073741_22
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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22330..23916
DNA (1587bp) protein (529aa)
Chloride peroxidase Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YZW8_DESAF
chloride peroxidase
Chloride peroxidase {ECO:0000313|EMBL:EGJ50923.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
S_p2_S4_coassembly_k141_2073741_23
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(24249..24452)
DNA (204bp) protein (68aa)
Cold shock protein, DNA binding Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIM3_9BACT
cspA; Cold shock protein, DNA binding
Cold shock protein, DNA binding {ECO:0000313|EMBL:CBE69380.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2073741_24
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(24612..26612)
DNA (2001bp) protein (667aa)
UvrABC system protein B Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIM4_9BACT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
uvrB; UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B)
S_p2_S4_coassembly_k141_2073741_25
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(26622..27167)
DNA (546bp) protein (182aa)
HNH endonuclease Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIM5_9BACT
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:CBE69382.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2073741_26

Not on your lists

27445..28620
DNA (1176bp) protein (392aa)
Aminotransferase, class V Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WGA6_ANEAE
Uncharacterized protein {ECO:0000313|EMBL:KKL06957.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
class V aminotransferase
S_p2_S4_coassembly_k141_2073741_27
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(28829..29770)
DNA (942bp) protein (314aa)
Putative Exopolyphosphatase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIM6_9BACT
Exopolyphosphatase
Putative Exopolyphosphatase {ECO:0000313|EMBL:CBE69383.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2073741_28
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(29771..31546)
DNA (1776bp) protein (592aa)
Putative Fibronectin-binding protein / Fibrinogen-bindingprotein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIM7_9BACT
Fibronectin-binding protein / Fibrinogen-bindingprotein
Putative Fibronectin-binding protein / Fibrinogen-bindingprotein {ECO:0000313|EMBL:CBE69384.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2073741_29
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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31724..32182
DNA (459bp) protein (153aa)
transcriptional regulator, MarR family bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
MarR family transcriptional regulator
Tax=CSP1_2_Dadabacteria
S_p2_S4_coassembly_k141_2073741_30
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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32382..32747
DNA (366bp) protein (122aa)
trx; thioredoxin
thioredoxin; K03671 thioredoxin 1 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Tax=RBG_16_Armatimonadetes_67_12_curated
Displaying items 1-30 of 32 in total

View Taxonomy