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S_p2_S4_coassembly_k141_3440629

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_3440629_1
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

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comp(3..1394)
DNA (1392bp) protein (464aa)
transmembrane_regions 129..151 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
S_p2_S4_coassembly_k141_3440629_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(1602..2624)
DNA (1023bp) protein (341aa)
Putative GHMP kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJG5_9BACT
GHMP kinase
Putative GHMP kinase {ECO:0000313|EMBL:CBE69550.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_3440629_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2624..3358)
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJG4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69549.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_3440629_4
R_NC10_66_22, NC10, Bacteria

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comp(3375..4022)
DNA (648bp) protein (216aa)
Uracil-DNA glycosylase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
uracil-DNA glycosylase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_3440629_5
unknown

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comp(4143..4283)
DNA (141bp) protein (47aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3440629_6
unknown

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comp(4338..4517)
DNA (180bp) protein (60aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3440629_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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4632..5144
DNA (513bp) protein (171aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
S_p2_S4_coassembly_k141_3440629_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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5170..6567
DNA (1398bp) protein (466aa)
aspartate ammonia-lyase (L-aspartase) (EC:4.3.1.1)
Putative aspartate ammonia-lyase (L-aspartase) {ECO:0000313|EMBL:CBE69544.1}; EC=4.3.1.1 {ECO:0000313|EMBL:CBE69544.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative aspartate ammonia-lyase (L-aspartase) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJF9_9BACT
S_p2_S4_coassembly_k141_3440629_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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6586..7152
DNA (567bp) protein (189aa)
hpt; hypoxanthine-guanine phosphoribosyltransferase (HGPRTase) (HGPRT) (EC:2.4.2.8)
Hypoxanthine-guanine phosphoribosyltransferase (HGPRTase) (HGPRT) {ECO:0000313|EMBL:CBE68446.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CBE68446.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036918AE
S_p2_S4_coassembly_k141_3440629_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7495..8511
DNA (1017bp) protein (339aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) {ECO:0000313|EMBL:CBE70039.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CBE70039.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLY2_9BACT
S_p2_S4_coassembly_k141_3440629_11
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8791..9099)
DNA (309bp) protein (103aa)
Cadherin domain protein (Fragment) Tax=Rhodopirellula sp. SWK7 RepID=M5SYG2_9PLAN
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AJM93207.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
S_p2_S4_coassembly_k141_3440629_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(9349..9786)
DNA (438bp) protein (146aa)
L-PSP (MRNA) endoribonuclease Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLY4_9BACT
tdcF; L-PSP (mRNA) endoribonuclease
L-PSP (MRNA) endoribonuclease {ECO:0000313|EMBL:CBE70041.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_3440629_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(9828..11630)
DNA (1803bp) protein (601aa)
UvrABC system protein C Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLY6_9BACT
uvrC; UvrABC system protein C (Protein uvrC) (Excinuclease ABC subunit C)
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_3440629_14
R_Chlamydiae_49_9, Chlamydiia, Chlamydiae, Bacteria

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12522..13739
DNA (1218bp) protein (406aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000373276D
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Chlamydiae_49_9_curated
S_p2_S4_coassembly_k141_3440629_15
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13750..17469
DNA (3720bp) protein (1240aa)
G8 domain-containing protein Tax=Thiocapsa marina 5811 RepID=F9UB79_9GAMM
G8 domain-containing protein {ECO:0000313|EMBL:EGV18697.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
hypothetical protein
S_p2_S4_coassembly_k141_3440629_16
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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17911..19422
DNA (1512bp) protein (504aa)
40-residue YVTN family beta-propeller repeat protein bin=GWA2_Planctomycete_KSU_39_15 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
40-residue YVTN family beta-propeller {ECO:0000313|EMBL:EOP43879.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD146.;"
YVTN beta-propeller repeat-containing protein
S_p2_S4_coassembly_k141_3440629_17
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(20012..21862)
DNA (1851bp) protein (617aa)
GTP-binding protein typA/bipA (Tyrosine phosphorylated protein A) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLY8_9BACT
typA; GTP-binding protein typA/bipA (Tyrosine phosphorylated protein A)
GTP-binding protein typA/bipA (Tyrosine phosphorylated protein A) {ECO:0000313|EMBL:CBE70045.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_3440629_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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22368..22655
DNA (288bp) protein (96aa)
Transcriptional regulator, XRE family protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFW1_9BACT
transcriptional regulator, XRE family protein
Transcriptional regulator, XRE family protein {ECO:0000313|EMBL:CBE68642.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_3440629_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

23386..23988
DNA (603bp) protein (201aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915, ECO:0000313|EMBL:CBE70046.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Peptidyl-prolyl cis-trans isomerase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLY9_9BACT
S_p2_S4_coassembly_k141_3440629_20
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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24073..25662
DNA (1590bp) protein (530aa)
Adenylate/guanylate cyclase Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J1Q8_RHOP2
adenylate/guanylate cyclase
Tax=CG_Desulfarul_01
S_p2_S4_coassembly_k141_3440629_21
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(25696..26604)
DNA (909bp) protein (303aa)
thrB; Homoserine kinase (HSK) (HK) (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Homoserine kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLZ0_9BACT
S_p2_S4_coassembly_k141_3440629_22
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

26770..27585
DNA (816bp) protein (272aa)
proC; Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Pyrroline-5-carboxylate reductase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLZ2_9BACT
S_p2_S4_coassembly_k141_3440629_23
R_NC10_66_22, NC10, Bacteria

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27785..28084
DNA (300bp) protein (100aa)
hypothetical protein
Hypothetical membrane protein bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_3440629_24
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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28084..28392
DNA (309bp) protein (103aa)
UPF0235 protein DAMO_2978 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLZ4_9BACT
hypothetical protein
UPF0235 protein DAMO_2978 {ECO:0000256|HAMAP-Rule:MF_00634}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_3440629_25
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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28673..28945
DNA (273bp) protein (91aa)
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
methylmalonate-semialdehyde dehydrogenase Tax=Arenimonas oryziterrae RepID=UPI0003B3CB91
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Displaying 25 items

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