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S_p2_S4_coassembly_k141_1348171_10

Organism: S_p2_S4_coassembly_NC10_61_204

near complete RP 49 / 55 BSCG 50 / 51 ASCG 11 / 38 MC: 1
Location: 10639..14073

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 1179.0
  • Bit_score: 1563
  • Evalue 0.0
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 1179.0
  • Bit_score: 1563
  • Evalue 0.0
Transcription-repair-coupling factor Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJM2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 1179.0
  • Bit_score: 1563
  • Evalue 0.0

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Taxonomy

Candidatus Methylomirabilis oxyfera → Candidatus Methylomirabilis → Bacteria

Sequences

DNA sequence
Length: 3435
ATGGAGCAATCGGAAGACCTGTTGGCCCGTCAGGCGGCGGAGATTGGGGCTCGCCTCCAGGGCGGAAACGACGCCGTGTCGCTCACCGGCCTCTTTGGGGCTTCGAAAGCGCCGATCCTCTCGGAGATCTCCCGTCAGACGGGGCGCTCCCTCCTGGTGTTGACCTCCTCTTCAGCCGAGGCCGAATCGCTCGCGAAGGACCTCCAGTTTTTCTCCCGCGAGCCGGTCGGGTACCTGCCGGAGCGTGAGGAGGATCCCGAGATACGATGGCAGCGGATCGCCTGCCTGGCAGGCCTGGCCGGCAAGGAGCTGCGGCTGGCGGTCGCCTCGATCCAGGCGGCCCTCGAGCGCCTCTCGCCTCCCGCGGCCCTGCTGGACGCGGCAATCACGCTGCGCGTGCACGGGCAGATCCCGCGGGACGAGCTGCTGCGCGCCCTGGACACGGGGGGCTACCGTCAGGCGAATCAGGTCACGGACCGTGGCGAGTACAGCCTGCGCGGAAACCTTCTCGACCTGTTCCCTCCCACAGGCGACGCTCCGGTCCGGGCCGAGTTTTTCGGCGACGAGCTGCTTTCCCTGCGCGAGTTCAACCCGGCCACCCAGCGCTCCGTCCGTCCTCTGCAGGAGACGATCGCCCTGCCGGTCGTTGAGGTTCCGCTAAGGGCCGACGCGTGCGAGGCGGCCCTTCGCGCCCTTCGCGCGGCGGAGCAGACCCAGGGAGGCCAGGTTCCCTTCGAGATTACCAAGGCGCTCGAAGACCGGCGGGCGTTCCCGGGAATGGAGGCCTATCTCCCCTACTTCTTTCCGGACACCGCCGATCTCCTTCAGTACGTCGCGCCCGACGCCATCCTGGTCCTGGCAGATCCGGGTGGCCTGGAGGCCCACGCGCGAGATTTCGCTGAACGGTGTCCGGCGTGCGGACTGCGGGGTGCGACGTCCAATGCCCCTCGCACCACGAGCGAATGCGCCTGTACCCTGGCGATCAAAGCACCACTCTTCGACTGGACCGACCTCGAGGCGAAACTCTCCCTCAGGCCGCGAATCTTCCTGGAGGAGTTCTCGCGGACCAACAGCGACGACGCCCACTCAACCATCGCCTTCCAAGCGGGCACCATCCCAGCCTACCGGGGACGACTGGGAGAGTTGGCACGTGACCTGGAAGGGTGGCAACGCGAAGGGCGGAGGATCCAACTGGTCTGCCGGAGCGAGGCGCAGGGCCGTCGGCTTCAAGAAGTGCTCAAGGAGCACGGACTCGCAGGGTCGATCGGCCAAGCGATGGCTTCCTCCGGCGAGATCGCCATCCTTTCGGGTGAGTTGAGCGGCGGGTTTCACCTCCATCAATTCGGCCTGACGTATATCACCGATGGCGAGATCTTTGGACCACGCCACATCCCTCGGCGCCGGGCCAGGCCGAAGGAGGCATCGCCGTTCGCCTCCTTTCAGGAACTCGCGTACGGGGATTTCGTCGTTCACGCGGATCACGGGATCGGCAAATACAAGGGACTTCGGCAGCTTGCTGCCGGCGGGATGGAGGGTGACTACCTCCTCATCACCTATGCCGATAATGCGAAGCTCTACGTCCCTGCGAGTAAACTGCAATTGGTCCACCGCTACCTGGGCGCCGATGGGGACCCGCCGGCGCTCGACCGGCTAGGCGGCACGTCCTGGGCCAGGGCCAAGGAGCGGGTCAAGGCCTCGATCCGCGAGATGGCTCAGGACCTGCTCACCTTATATGCCGCCAGGCAAGTCATCGGCGGCCACGCCTTCCCGCCCGATACCACCTGGCAGCGGGAGTTCGAGGCCGGCTTCCCCTACGAGGAGACCCCGGGGCAGCTCCAGGCGATCGCCGATGTCAGGGCCGACATGGAGCGAGACCGGCCCATGGATCGTCTGATCTGCGGGGACGTCGGGTACGGCAAGACCGAGGTCGCGATGCGCGCCGCGTTCAAGGCGGCCATGGGAGGAAAGCAGGTAGCCGTACTGGTCCCGACCACTGTCCTGGCCCTGCAACACCTCCAGACCTTTTCCGAGCGGTTCAGCAGCGTTCCCATCAAGGTGGAGATGCTCTCCCGCTTCCGCAGCAGGAAGGAGCAGGCCGCTGTGCTGCGCGGCGTTCGTGATGGGACGGTGGACATCGTCATCGGCACCCACCGCCTCCTGCAGAAGGATGTCAGTTTCCGGGACCTGGGTCTTCTCGTGGTGGACGAAGAGCACCTCTTTGGCGTCGCGGCCAAGGAACGCCTGAAGCAGCTCAGGCGACAGGTGGATGTCCTGATCCTGACCGCGACCCCGATCCCGAGGACCCTCCATATGTCGATGTTGGGGGTCCGGGATATCAGCACCATCGAGACGCCACCAGAAGACCGCCTCTCGATCAAGACGACCGTCGCCCGGTTTGATCCGGCCCTCATCCAGGAGGCGATCCAGCAGGAGTTGGACCGCGGGGGTCAGGCCTTCTTCGTTCACAATCGTGTGGAGAGCATCCACACCATTGCCCGCCTGATCAAGCGCCTGGTCCCCCAGGCCAGGCTGGCCGTCGCCCACGGGGAACTGCCGGAAGCGCGCCTTGAACGGATCATGTGTGATTTCTACGCCGGCACGTTCAACGTCCTCCTGTGCACCACCATCATCGAATCCGGTCTGGACGTCGGCACCGCCAACACCATCATCATCGACCGGGCCGACGCCCTCGGCTTGGCGCAGCTCTACCAACTCCGCGGGCGGGTCGGTCGCGACAGGCGCCGAGCGTTTGCCTACCTCCTGGTACCGGAGAATGCCGCGCTCACCGAGGTGGCAAAGAAACGGCTCCAGGTGATCGCGGAACTGACCGAACTTGGCTCCGGATTCAAGGTGGCGGCCAGGGATCTGGAAATCCGGGGGGCGGGCAACCTCCTGGGTCCGGAGCAGCACGGCCAGATCGCCGCTGTTGGATTCGATCTCTATTGCCGGCTGATCGAGTCAACCATCAGGGAGTTGAAGGGCGAAGTGGCGGCCGAGTCGGTCGAGCCTTCCATGAAGCTGGAGGCGGAGGGCTATCTGCCGGAGGCCTACATCGAAGACCCCAACGTCAGGCTCCATTTGTACAAACGGCTGAACGCTCTCTCGGGGCCGGAAGAGGTCCCCGTGTTTCGAGAGGAATTGATCGATCGATTCGGCGAGCTCCCGCCACAGGCGGAGCGGCTGCTGACCGCAGTAGCCTTGCGGGTCGTGGCGCGGTCGCTGGCCATTCGTGAGGTTGATGCCAGGAGCGAGACGATCCGCCTCATCTTCAGTGACTCGCCACCCCTTGCCTCGGCAAAGGTGGCGGCCCTGTTCAGCGCAGAGGCTGGCCGTCTGCGCTACGTCCCCCCGGGCACCCTGGAGTACCGGGTGAATGGTGGTGACAGGATCACCCTTGTCCAGAGCCTTCTTGCGCGCTTGCAGGAGTGCCGATGA
PROTEIN sequence
Length: 1145
MEQSEDLLARQAAEIGARLQGGNDAVSLTGLFGASKAPILSEISRQTGRSLLVLTSSSAEAESLAKDLQFFSREPVGYLPEREEDPEIRWQRIACLAGLAGKELRLAVASIQAALERLSPPAALLDAAITLRVHGQIPRDELLRALDTGGYRQANQVTDRGEYSLRGNLLDLFPPTGDAPVRAEFFGDELLSLREFNPATQRSVRPLQETIALPVVEVPLRADACEAALRALRAAEQTQGGQVPFEITKALEDRRAFPGMEAYLPYFFPDTADLLQYVAPDAILVLADPGGLEAHARDFAERCPACGLRGATSNAPRTTSECACTLAIKAPLFDWTDLEAKLSLRPRIFLEEFSRTNSDDAHSTIAFQAGTIPAYRGRLGELARDLEGWQREGRRIQLVCRSEAQGRRLQEVLKEHGLAGSIGQAMASSGEIAILSGELSGGFHLHQFGLTYITDGEIFGPRHIPRRRARPKEASPFASFQELAYGDFVVHADHGIGKYKGLRQLAAGGMEGDYLLITYADNAKLYVPASKLQLVHRYLGADGDPPALDRLGGTSWARAKERVKASIREMAQDLLTLYAARQVIGGHAFPPDTTWQREFEAGFPYEETPGQLQAIADVRADMERDRPMDRLICGDVGYGKTEVAMRAAFKAAMGGKQVAVLVPTTVLALQHLQTFSERFSSVPIKVEMLSRFRSRKEQAAVLRGVRDGTVDIVIGTHRLLQKDVSFRDLGLLVVDEEHLFGVAAKERLKQLRRQVDVLILTATPIPRTLHMSMLGVRDISTIETPPEDRLSIKTTVARFDPALIQEAIQQELDRGGQAFFVHNRVESIHTIARLIKRLVPQARLAVAHGELPEARLERIMCDFYAGTFNVLLCTTIIESGLDVGTANTIIIDRADALGLAQLYQLRGRVGRDRRRAFAYLLVPENAALTEVAKKRLQVIAELTELGSGFKVAARDLEIRGAGNLLGPEQHGQIAAVGFDLYCRLIESTIRELKGEVAAESVEPSMKLEAEGYLPEAYIEDPNVRLHLYKRLNALSGPEEVPVFREELIDRFGELPPQAERLLTAVALRVVARSLAIREVDARSETIRLIFSDSPPLASAKVAALFSAEAGRLRYVPPGTLEYRVNGGDRITLVQSLLARLQECR*