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S_p2_S4_coassembly_k141_644761

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_644761_1
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(117..803)
DNA (687bp) protein (229aa)
Glycosyltransferases involved in cell wall biogenesis Tax=Chthonomonas calidirosea T49 RepID=S0EVL5_9BACT
Glycosyltransferases involved in cell wall biogenesis
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
S_p2_S4_coassembly_k141_644761_2
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(820..1989)
DNA (1170bp) protein (390aa)
Putative lipopolysaccharide o-antigen ligase transmembrane protein bin=GWC2_Elusimicrobia_64_44 species=Cupriavidus taiwanensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
polymerase
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
S_p2_S4_coassembly_k141_644761_3
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1979..3115)
DNA (1137bp) protein (379aa)
Putative uncharacterized protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASL9_RUBXD
hypothetical protein
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p2_S4_coassembly_k141_644761_4
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3112..3876)
DNA (765bp) protein (255aa)
hypothetical protein Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000363FDB1
polysaccharide deacetylase
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p2_S4_coassembly_k141_644761_5
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3873..4856)
DNA (984bp) protein (328aa)
Methicillin resistance protein Tax=Rhodovulum sp. PH10 RepID=J6IXT5_9RHOB
methicillin resistance protein
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p2_S4_coassembly_k141_644761_6
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(4853..5878)
DNA (1026bp) protein (342aa)
hypothetical protein bin=GWA2_OP3_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=CG_Elusi_04
S_p2_S4_coassembly_k141_644761_7
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5869..6780)
DNA (912bp) protein (304aa)
glycosyltransferase bin=bin3_NC10 species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
family 2 glycosyl transferase
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p2_S4_coassembly_k141_644761_8
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(6782..7690)
DNA (909bp) protein (303aa)
dTDP-4-dehydrorhamnose reductase Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D555_METSW bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
dTDP-4-dehydrorhamnose reductase
Tax=CG_Elusi_04
S_p2_S4_coassembly_k141_644761_9
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(7687..8808)
DNA (1122bp) protein (374aa)
Glycosyl transferase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67QF7_SYMTH
glycosyl transferase family protein
Tax=CG_Elusi_04
S_p2_S4_coassembly_k141_644761_10
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8801..9784)
DNA (984bp) protein (328aa)
Methyltransferase type 12 bin=GWA2_Elusi_like_61_42 species=Desulfovibrio sp. FW1012B genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
type 12 methyltransferase
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p2_S4_coassembly_k141_644761_11
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9777..10493)
DNA (717bp) protein (239aa)
hypothetical protein bin=GWA2_Ignavibacteria-rel_35_8 species=Geitlerinema sp. PCC 7407 genus=Geitlerinema taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AFY68055.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
S_p2_S4_coassembly_k141_644761_12
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(10498..11493)
DNA (996bp) protein (332aa)
KpsF/GutQ family protein (EC:5.3.1.13)
Sugar isomerase, KpsF/GutQ family Tax=Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639 RepID=N1VTL2_9LEPT
Tax=CG_Elusi_04
S_p2_S4_coassembly_k141_644761_13
GWA2_OP3_50_21_curated, Omnitrophica, Bacteria

Not on your lists

11511..13148
DNA (1638bp) protein (546aa)
SulP family sulfate permease bin=GWA2_OP3_52_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
sulfate transporter
Tax=GWA2_OP3_50_21_curated
S_p2_S4_coassembly_k141_644761_14
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

13145..13546
DNA (402bp) protein (134aa)
Class I peptide chain release factor bin=GWA2_Elusimicrobia_66_18 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
peptide chain release factor 1
Tax=GWC2_Elusimicrobia_65_9_curated
S_p2_S4_coassembly_k141_644761_15
unknown

Not on your lists

13918..14802
DNA (885bp) protein (295aa)

This feature has no annotations

S_p2_S4_coassembly_k141_644761_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14918..15718
DNA (801bp) protein (267aa)
Monophosphatase CysQ-like protein Tax=Mycobacterium yongonense 05-1390 RepID=S4ZI26_9MYCO
3'(2'),5'-bisphosphate nucleotidase
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:AHG93581.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S_p2_S4_coassembly_k141_644761_17
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

15808..16647
DNA (840bp) protein (280aa)
UPI0003D65105 related cluster Tax=unknown RepID=UPI0003D65105
transposase IS1595
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
S_p2_S4_coassembly_k141_644761_18
unknown

Not on your lists

comp(17474..18373)
DNA (900bp) protein (300aa)

This feature has no annotations

S_p2_S4_coassembly_k141_644761_19
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18501..19499)
DNA (999bp) protein (333aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria-rel_35_8 species=Methanococcoides burtonii genus=Methanococcoides taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
S_p2_S4_coassembly_k141_644761_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19722..20534)
DNA (813bp) protein (271aa)
Short-chain dehydrogenase/reductase SDR bin=GWA2_Elusimicrobia_69_24 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S_p2_S4_coassembly_k141_644761_21
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20531..21334)
DNA (804bp) protein (268aa)
N-acylneuraminate cytidylyltransferase Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P1M4_GRAMM
N-acylneuraminate cytidylyltransferase
Tax=GWC2_Elusimicrobia_65_9_curated
S_p2_S4_coassembly_k141_644761_22
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(21331..22317)
DNA (987bp) protein (329aa)
Oxidoreductase domain-containing protein Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SFN0_INTC7
oxidoreductase domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
S_p2_S4_coassembly_k141_644761_23
R_OD1_Yanofskybacteria_39_8b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(22319..23305)
DNA (987bp) protein (329aa)
Uncharacterized protein Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5A9_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_39_8b_curated
S_p2_S4_coassembly_k141_644761_24
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(23307..24224)
DNA (918bp) protein (306aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=GWC2_Nitrospirae_57_13_curated
S_p2_S4_coassembly_k141_644761_25
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24221..25189)
DNA (969bp) protein (323aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V7G2_ARCNC
S_p2_S4_coassembly_k141_644761_26
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(25186..26328)
DNA (1143bp) protein (381aa)
sulfate adenylyltransferase (EC:2.7.1.25 2.7.7.4)
Sulfate adenylyltransferase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDN1_9FIRM
Tax=GWF2_Lentisphaerae_44_16_curated
S_p2_S4_coassembly_k141_644761_27
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(26325..26921)
DNA (597bp) protein (199aa)
adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
adenylylsulfate kinase Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B5B742
S_p2_S4_coassembly_k141_644761_28
Micromonospora sp. NRRL B-16802, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26947..27681
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=Micromonospora sp. NRRL B-16802 RepID=U5YNH8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AGZ94284.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. NRRL B-16802.;"
hypothetical protein
S_p2_S4_coassembly_k141_644761_29
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27720..28805
DNA (1086bp) protein (362aa)
N-acetylneuraminate synthase (EC:2.5.1.56)
hypothetical protein Tax=Cohnella laeviribosi RepID=UPI00036FD146
N-acetylneuraminate synthase {ECO:0000313|EMBL:EJL81415.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
S_p2_S4_coassembly_k141_644761_30
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

28818..29726
DNA (909bp) protein (303aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
hypothetical protein Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00037CF17F
Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
Displaying items 1-30 of 49 in total

View Taxonomy