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S_p2_S4_coassembly_k141_3285044

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_3285044_1

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222..1865
DNA (1644bp) protein (548aa)
Lytic transglycosylase catalytic Tax=uncultured bacterium RepID=K2A6T9_9BACT
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EKD51973.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
soluble lytic murein transglycosylase-like protein
S_p2_S4_coassembly_k141_3285044_2
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1834..2496)
DNA (663bp) protein (221aa)
Thiamine pyrophosphokinase bin=GWA2_Elusimicrobia_66_18 species=Ruminococcus champanellensis genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
thiamine pyrophosphokinase
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
S_p2_S4_coassembly_k141_3285044_3
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2493..3257)
DNA (765bp) protein (255aa)
RNA methyltransferase, TrmH family, group 3 bin=GWA2_Elusimicrobia_66_18 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
rRNA methylase
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
S_p2_S4_coassembly_k141_3285044_4
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3254..4630)
DNA (1377bp) protein (459aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p2_S4_coassembly_k141_3285044_5
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

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comp(4682..5839)
DNA (1158bp) protein (386aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Tax=GWC2_Elusimicrobia_65_9_curated
S_p2_S4_coassembly_k141_3285044_6
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

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comp(5836..6834)
DNA (999bp) protein (333aa)
Hypothetical membrane protein bin=GWA2_Elusimicrobia_66_18 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
PilT protein domain-containing protein
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p2_S4_coassembly_k141_3285044_7
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

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comp(6887..8200)
DNA (1314bp) protein (438aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p2_S4_coassembly_k141_3285044_8
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(8308..9885)
DNA (1578bp) protein (526aa)
Putative uncharacterized protein Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BGJ6_CHLPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL65523.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain DSM 266).;"
S_p2_S4_coassembly_k141_3285044_9
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

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comp(9887..10552)
DNA (666bp) protein (222aa)
type II site-specific deoxyribonuclease (EC:3.1.21.4)
Type II restriction enzyme SalI (Endonuclease SalI) (R.SalI) bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RBG_16_Planctomycetes_59_8_curated
S_p2_S4_coassembly_k141_3285044_10
unknown

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10620..10787
DNA (168bp) protein (56aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3285044_11
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10911..12242)
DNA (1332bp) protein (444aa)
ABC-type transport system involved in resistance to organic solvents, periplasmic component bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
organic solvents resistance ABC transporter periplasmic protein
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
S_p2_S4_coassembly_k141_3285044_12
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12299..13075)
DNA (777bp) protein (259aa)
ABC transporter related bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
ABC transporter-like protein
Tax=GWC2_Elusimicrobia_65_9_curated
S_p2_S4_coassembly_k141_3285044_13
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13089..13880)
DNA (792bp) protein (264aa)
ABC transporter related bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
ABC transporter-like protein
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
S_p2_S4_coassembly_k141_3285044_14
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13877..15046)
DNA (1170bp) protein (390aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p2_S4_coassembly_k141_3285044_15
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15043..16434)
DNA (1392bp) protein (464aa)
Replicative DNA helicase bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
replicative DNA helicase
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p2_S4_coassembly_k141_3285044_16
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists


comp(16441..16887)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
50S ribosomal protein L9
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p2_S4_coassembly_k141_3285044_17
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists


comp(16919..17248)
DNA (330bp) protein (110aa)
30S ribosomal protein S18 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
30S ribosomal protein S18
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
S_p2_S4_coassembly_k141_3285044_18
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17248..17682)
DNA (435bp) protein (145aa)
Single-stranded DNA-binding protein bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
single-strand binding protein
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p2_S4_coassembly_k141_3285044_19
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists


comp(17685..18032)
DNA (348bp) protein (116aa)
30S ribosomal protein S6 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
30S ribosomal protein S6
Tax=GWC2_Elusimicrobia_65_9_curated
S_p2_S4_coassembly_k141_3285044_20
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

18154..18408
DNA (255bp) protein (85aa)
MerR family regulatory protein bin=GWA2_Elusimicrobia_66_18 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
DNA binding domain protein, excisionase family (fragment)
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p2_S4_coassembly_k141_3285044_21
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

18512..18733
DNA (222bp) protein (74aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_66_18 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=GWC2_Elusimicrobia_65_9_curated
S_p2_S4_coassembly_k141_3285044_22
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

18802..19173
DNA (372bp) protein (124aa)
2-dehydropantoate 2-reductase bin=GWA2_Elusimicrobia_66_18 species=Pseudomonas psychrotolerans genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
2-dehydropantoate 2-reductase family protein
Tax=GWC2_Elusimicrobia_65_9_curated
S_p2_S4_coassembly_k141_3285044_23
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

19170..20114
DNA (945bp) protein (315aa)
Bifunctional protein FolD bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
methylenetetrahydrofolate dehydrogenase
Tax=GWC2_Elusimicrobia_65_9_curated
S_p2_S4_coassembly_k141_3285044_24
unknown

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comp(20063..21646)
DNA (1584bp) protein (528aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3285044_25
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21681..22241)
DNA (561bp) protein (187aa)
Uncharacterized protein Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFB6_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB48735.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Displaying 25 items

View Taxonomy