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S_p2_S4_coassembly_k141_422701

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_422701_1
unknown

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453..1064
DNA (612bp) protein (204aa)

This feature has no annotations

S_p2_S4_coassembly_k141_422701_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(1102..2190)
DNA (1089bp) protein (363aa)
tRNA (Guanine37-N1) -methyltransferase; K15429 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Met-10+ like protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_422701_3

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comp(2394..4064)
DNA (1671bp) protein (557aa)
id=5046362 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46163.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
S_p2_S4_coassembly_k141_422701_4
unknown

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4379..4567
DNA (189bp) protein (63aa)

This feature has no annotations

S_p2_S4_coassembly_k141_422701_5
CG_Wirth_01, Wirthbacteria, Bacteria

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4945..6288
DNA (1344bp) protein (448aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A6F8_THEGJ
Tax=CG_Wirth_01
S_p2_S4_coassembly_k141_422701_6
unknown

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6309..7502
DNA (1194bp) protein (398aa)

This feature has no annotations

S_p2_S4_coassembly_k141_422701_7

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7908..8915
DNA (1008bp) protein (336aa)
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L3
S_p2_S4_coassembly_k141_422701_8

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9027..9827
DNA (801bp) protein (267aa)
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12056.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L4
S_p2_S4_coassembly_k141_422701_9
AR17, Woesearchaeaota, DPANN, Archaea

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9951..10214
DNA (264bp) protein (88aa)
50S ribosomal protein L23P Tax=Thermococcus RepID=RL23_PYRKO bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L23P
Tax=AR17
S_p2_S4_coassembly_k141_422701_10

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10332..11045
DNA (714bp) protein (238aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS12055.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L2
S_p2_S4_coassembly_k141_422701_11

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11147..11530
DNA (384bp) protein (128aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036287C9
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S19P
S_p2_S4_coassembly_k141_422701_12

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11725..12270
DNA (546bp) protein (182aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal)
S_p2_S4_coassembly_k141_422701_13

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12403..13236
DNA (834bp) protein (278aa)
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps3p; 30S ribosomal protein S3P; K02982 small subunit ribosomal protein S3 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S3
S_p2_S4_coassembly_k141_422701_14
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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13297..13527
DNA (231bp) protein (77aa)
50S ribosomal protein L29P Tax=Pyrococcus furiosus RepID=RL29_PYRFU
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus COM1.;"
S_p2_S4_coassembly_k141_422701_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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13586..13906
DNA (321bp) protein (107aa)
translation initiation factor 1 (eIF-1/SUI1); K03113 translation initiation factor 1 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
translation initiation factor 1 (eif-1/sui1)
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_422701_16

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13934..14230
DNA (297bp) protein (99aa)
ribonuclease P protein component 1; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|HAMAP-Rule:MF_00754}; species="Archaea.;" source="archaeon GW2011_AR3.;"
S_p2_S4_coassembly_k141_422701_17

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14376..14690
DNA (315bp) protein (105aa)
30S ribosomal protein S17P Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VYH7_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17P
S_p2_S4_coassembly_k141_422701_18

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14797..15207
DNA (411bp) protein (137aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L14P
S_p2_S4_coassembly_k141_422701_19

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15338..15775
DNA (438bp) protein (146aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24P
S_p2_S4_coassembly_k141_422701_20
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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15894..16616
DNA (723bp) protein (241aa)
30S ribosomal protein S4e Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7K5_METSW
30S ribosomal protein S4
Tax=RBG_13_Woesearchaeota_36_6_curated
Displaying 20 items

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