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S_p2_S4_coassembly_k141_3727842

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_3727842_1
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

73..336
DNA (264bp) protein (88aa)
Putative uncharacterized protein Tax=Methanococcus maripaludis RepID=G0H4T0_METMI bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
S_p2_S4_coassembly_k141_3727842_2
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

333..557
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTB9_METAC bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
S_p2_S4_coassembly_k141_3727842_3
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


comp(723..1367)
DNA (645bp) protein (215aa)
O-sialoglycoprotein endopeptidase (EC:2.7.11.1 3.4.24.57)
O-sialoglycoprotein endopeptidase Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B3D796
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000256|HAMAP-Rule:MF_01447}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
S_p2_S4_coassembly_k141_3727842_4
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists


comp(1656..1868)
DNA (213bp) protein (71aa)
30S ribosomal protein S28e bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S28
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p2_S4_coassembly_k141_3727842_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


comp(1982..2362)
DNA (381bp) protein (127aa)
50S ribosomal protein L7Ae Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RL7A_AERPE
rpl7ae; 50S ribosomal protein L7
Tax=CG_Aenigma_01
S_p2_S4_coassembly_k141_3727842_6
unknown

Not on your lists

2581..3672
DNA (1092bp) protein (364aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3727842_7
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(3681..5441)
DNA (1761bp) protein (587aa)
Glutamate--tRNA ligase {ECO:0000256|SAAS:SAAS00088701}; EC=6.1.1.17 {ECO:0000256|SAAS:SAAS00088701};; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
gltX; glutamate--tRNA ligase (EC:6.1.1.17)
Glutamyl-tRNA synthetase, archaeal and eukaryotic family Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U9G0_9EURY
S_p2_S4_coassembly_k141_3727842_8
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


comp(5487..6215)
DNA (729bp) protein (243aa)
30S ribosomal protein S2 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS2_METKA
rps2P; 30S ribosomal protein S2
Tax=CG_Aenigma_01
S_p2_S4_coassembly_k141_3727842_9

Not on your lists

6303..7196
DNA (894bp) protein (298aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2ED35_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKQ57584.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
S_p2_S4_coassembly_k141_3727842_10
unknown

Not on your lists

7207..7404
DNA (198bp) protein (66aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3727842_11
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7410..8555)
DNA (1146bp) protein (382aa)
eno-2; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
Enolase Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IB05_METCZ
S_p2_S4_coassembly_k141_3727842_12
unknown

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comp(8616..9467)
DNA (852bp) protein (284aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3727842_13
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9516..9716)
DNA (201bp) protein (67aa)
DNA-directed RNA polymerase subunit K {ECO:0000255|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00192};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
DNA-directed RNA polymerase subunit K Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=RPOK_METAC
rpoK; DNA-directed RNA polymerase subunit K
S_p2_S4_coassembly_k141_3727842_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

9764..10255
DNA (492bp) protein (164aa)
alias=gwa2_scaffold_521_221 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
S_p2_S4_coassembly_k141_3727842_15
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(10264..11055)
DNA (792bp) protein (264aa)
hypothetical protein; K07159 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=CG_Aenigma_01
S_p2_S4_coassembly_k141_3727842_16
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(11281..12111)
DNA (831bp) protein (277aa)
Translation initiation factor 2 subunit alpha bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
translation initiation factor IF-2
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p2_S4_coassembly_k141_3727842_17
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(12147..12323)
DNA (177bp) protein (59aa)
30S ribosomal protein S27e Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZL7_FERPA
ribosomal protein S27E
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000256|RuleBase:RU000671}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
S_p2_S4_coassembly_k141_3727842_18
unknown

Not on your lists

comp(12325..12420)
DNA (96bp) protein (32aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3727842_19
unknown

Not on your lists

comp(12359..12520)
DNA (162bp) protein (54aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3727842_20
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(12563..12856)
DNA (294bp) protein (98aa)
50S ribosomal protein L44e Tax=Thermococcus sp. AM4 RepID=B7R1F7_9EURY
50S ribosomal protein L44e
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. AM4.;"
S_p2_S4_coassembly_k141_3727842_21
unknown

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12962..14113
DNA (1152bp) protein (384aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3727842_22
unknown

Not on your lists

14148..15146
DNA (999bp) protein (333aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3727842_23
unknown

Not on your lists

15147..15497
DNA (351bp) protein (117aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3727842_24
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(15494..16144)
DNA (651bp) protein (217aa)
hypothetical protein bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=AR5
S_p2_S4_coassembly_k141_3727842_25
R_OP11_Daviesbacteria_36_13, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

16281..17189
DNA (909bp) protein (303aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=PYRB_PYRAB
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_36_13_curated
S_p2_S4_coassembly_k141_3727842_26
Aphanomyces invadans, Aphanomyces, Saprolegniales, Eukaryota

Not on your lists

17264..18454
DNA (1191bp) protein (397aa)
Phosphoglycerate kinase {ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|RuleBase:RU000532};; species="Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Aphanomyces.;" source="Aphanomyces invadans.;"
Phosphoglycerate kinase Tax=Galdieria sulphuraria RepID=M2W0C4_GALSU
S_p2_S4_coassembly_k141_3727842_27
Sulfolobus acidocaldarius, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

18467..19498
DNA (1032bp) protein (344aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388};; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559}; species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus acidocaldarius N8.;"
Glyceraldehyde-3-phosphate dehydrogenase Tax=Sulfolobus acidocaldarius RepID=G3P_SULAC
S_p2_S4_coassembly_k141_3727842_28
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

19526..20620
DNA (1095bp) protein (365aa)
fbp; bifunctional fructose-1,6-bisphosphatase (EC:3.1.3.11)
Bifunctional fructose-1,6-bisphosphatase {ECO:0000313|EMBL:AJM92333.1}; EC=3.1.3.11 {ECO:0000313|EMBL:AJM92333.1};; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
Uncharacterized protein Tax=Nitrosopumilaceae RepID=K0B4E9_9ARCH
S_p2_S4_coassembly_k141_3727842_29
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

20624..21283
DNA (660bp) protein (220aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA2).;"
Triosephosphate isomerase Tax=Pyrococcus sp. (strain NA2) RepID=F4HKF5_PYRSN
triosephosphate isomerase
S_p2_S4_coassembly_k141_3727842_30
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(21288..21815)
DNA (528bp) protein (176aa)
Uncharacterized protein (Fragment) bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=AR5
Displaying items 1-30 of 43 in total

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