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S_p2_S4_coassembly_k141_609641

Search features with annotation key words

Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_609641_1
Oreochromis niloticus, Oreochromis, Cichliformes, Neopterygii, Chordata, Metazoa

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comp(82..567)
DNA (486bp) protein (162aa)
Uncharacterized protein (Fragment) Tax=Oreochromis niloticus RepID=I3JPV3_ORENI
Uncharacterized protein {ECO:0000313|Ensembl:ENSONIP00000010897}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis.;" source="Oreochromis niloticus (Nile tilapia) (Tilapia nilotica).;"
S_p2_S4_coassembly_k141_609641_2
unknown

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comp(646..1425)
DNA (780bp) protein (260aa)

This feature has no annotations

S_p2_S4_coassembly_k141_609641_3
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(1456..2028)
DNA (573bp) protein (191aa)
transmembrane_regions bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
S_p2_S4_coassembly_k141_609641_4
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(1988..3019)
DNA (1032bp) protein (344aa)
hypothetical protein Tax=Thermococcus zilligii RepID=UPI00029ABD36
hypothetical protein
Tax=CG_Woesearch_01
S_p2_S4_coassembly_k141_609641_5
CG_Micra_06, Micraarchaeota, Archaea

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comp(3051..3599)
DNA (549bp) protein (183aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] bin=WS6_GWC1_33_20 species=WS6_GWE1_33_547 genus=WS6_GWE1_33_547 taxon_order=WS6_GWE1_33_547 taxon_class=WS6_GWE1_33_547 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Tax=CG_Micra_06
S_p2_S4_coassembly_k141_609641_6
unknown

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3764..4402
DNA (639bp) protein (213aa)

This feature has no annotations

S_p2_S4_coassembly_k141_609641_7
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(4410..4799)
DNA (390bp) protein (130aa)
aif5A; translation initiation factor 5A precursor (eIF-5A); K03263 translation initiation factor 5A bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
translation initiation factor eIF-5A
Tax=AR5
S_p2_S4_coassembly_k141_609641_8
unknown

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comp(4983..5396)
DNA (414bp) protein (138aa)

This feature has no annotations

S_p2_S4_coassembly_k141_609641_9

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comp(5451..5663)
DNA (213bp) protein (71aa)
Transcription factor CBF/NF-Y/archaeal histone bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Transcription factor CBF/NF-Y/histone protein {ECO:0000313|EMBL:KHO48101.1}; species="Archaea.;" source="archaeon GW2011_AR5.;"
transcription factor CBF/NF-Y/histone domain-containing protein
S_p2_S4_coassembly_k141_609641_10
unknown

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5884..6312
DNA (429bp) protein (143aa)

This feature has no annotations

S_p2_S4_coassembly_k141_609641_11
unknown

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6345..6800
DNA (456bp) protein (152aa)

This feature has no annotations

S_p2_S4_coassembly_k141_609641_12
AR5, Aenigmarchaeota, DPANN, Archaea

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6941..7195
DNA (255bp) protein (85aa)
Transcription initiation factor IIB bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
tfb; transcription initiation factor IIB
Tax=AR5
Displaying 12 items

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