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S_p2_S4_coassembly_k141_3691202

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_3691202_1
GWE2_OD1_42_7, Magasanikbacteria, Parcubacteria, Bacteria

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3..278
DNA (276bp) protein (92aa)
Extracellular ligand-binding receptor {ECO:0000313|EMBL:KKS70222.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWE2_42_7.;"
S_p2_S4_coassembly_k141_3691202_2
unknown

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265..426
DNA (162bp) protein (54aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3691202_3
unknown

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442..666
DNA (225bp) protein (75aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3691202_4
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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748..1068
DNA (321bp) protein (107aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1).;"
Ribonuclease VapC Tax=Sulfolobus islandicus RepID=C3NBH2_SULIY
PilT protein domain-containing protein
S_p2_S4_coassembly_k141_3691202_5
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

Not on your lists

1077..1943
DNA (867bp) protein (289aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI00036FA607
ABC transporter permease
Tax=GWF2_Planctomycetes_40_8_curated
S_p2_S4_coassembly_k141_3691202_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

1940..3046
DNA (1107bp) protein (369aa)
ABC transporter branched-chain amino acid-binding protein LivK Tax=Sporomusa ovata DSM 2662 RepID=T0IWD2_9FIRM
ABC transporter substrate-binding protein
Tax=RBG_13_Bathyarchaeota_38_9_curated
S_p2_S4_coassembly_k141_3691202_7
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

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3036..4211
DNA (1176bp) protein (392aa)
Extracellular ligand-binding receptor Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LU65_TEPAE
Extracellular ligand-binding receptor
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
S_p2_S4_coassembly_k141_3691202_8
unknown

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4274..4399
DNA (126bp) protein (42aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3691202_9
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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4444..4758
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0D7_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI62159.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
S_p2_S4_coassembly_k141_3691202_10
GWA2_OD1_49_9, Parcubacteria, Bacteria

Not on your lists

4808..5233
DNA (426bp) protein (142aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00035E98E7
Ligand-binding protein, receptor family {ECO:0000313|EMBL:KKW10150.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_49_9.;"
putative high-affinity branched-chain amino acid ABC transporter amino acid-binding protein
S_p2_S4_coassembly_k141_3691202_11
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(5242..5973)
DNA (732bp) protein (244aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036A7155
Transcriptional regulator, TrmB {ECO:0000313|EMBL:KKT92456.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
transcriptional regulator TrmB
S_p2_S4_coassembly_k141_3691202_12
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

6056..7180
DNA (1125bp) protein (375aa)
branched chain amino acid ABC transporter; K01999 branched-chain amino acid transport system substrate-binding protein bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Branched chain amino acid ABC transporter {ECO:0000313|EMBL:KKT43183.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
extracellular ligand-binding receptor
S_p2_S4_coassembly_k141_3691202_13
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(7232..7570)
DNA (339bp) protein (113aa)
Tax=AR13
S_p2_S4_coassembly_k141_3691202_14
unknown

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comp(7545..7814)
DNA (270bp) protein (90aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3691202_15
unknown

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7874..8035
DNA (162bp) protein (54aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3691202_16
unknown

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8096..8275
DNA (180bp) protein (60aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3691202_17

Not on your lists

8277..8660
DNA (384bp) protein (128aa)
PilT-like protein Tax=Beggiatoa sp. PS RepID=A7C4R1_9GAMM
Marine sediment metagenome DNA, contig: S06H3_C01403 {ECO:0000313|EMBL:GAH95795.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S_p2_S4_coassembly_k141_3691202_18
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

8682..9581
DNA (900bp) protein (300aa)
livM5; protein LivM5; K01998 branched-chain amino acid transport system permease protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative high-affinity branched-chain amino acid ABC transporter permease
Tax=CG_Micra_02
S_p2_S4_coassembly_k141_3691202_19
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

9642..9875
DNA (234bp) protein (78aa)
Transcriptional regulator, AbrB family Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RYJ0_FERPA
AbrB family transcriptional regulator
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ADC65553.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
S_p2_S4_coassembly_k141_3691202_20
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

9872..10246
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon E-plasma RepID=T0MP78_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB65026.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-plasma.;"
PilT protein domain protein
S_p2_S4_coassembly_k141_3691202_21
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

10256..12634
DNA (2379bp) protein (793aa)
DNA helicase RecQ Tax=planctomycete KSU-1 RepID=I3IKR7_9PLAN
ATP-dependent DNA helicase RecQ
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
S_p2_S4_coassembly_k141_3691202_22
unknown

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12594..12839
DNA (246bp) protein (82aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3691202_23
unknown

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comp(13000..13386)
DNA (387bp) protein (129aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3691202_24
R_PER_46_8, Bacteria

Not on your lists

comp(13392..14495)
DNA (1104bp) protein (368aa)
amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_PER_46_8_curated
S_p2_S4_coassembly_k141_3691202_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

14593..15312
DNA (720bp) protein (240aa)
transcriptional regulator TrmB bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative transcriptional regulator
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p2_S4_coassembly_k141_3691202_26
unknown

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15388..15513
DNA (126bp) protein (42aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3691202_27
Bacillus sp. OxB-1, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15592..16347
DNA (756bp) protein (252aa)
branched-chain amino acid ABC transporter ATP-binding protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B38B2C
branched-chain amino acid ABC transporter
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:BAQ09601.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. (strain OxB-1).;"
S_p2_S4_coassembly_k141_3691202_28

Not on your lists

comp(16348..16617)
DNA (270bp) protein (90aa)
Marine sediment metagenome DNA, contig: S06H3_C01403 {ECO:0000313|EMBL:GAH95795.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Uncharacterized protein bin=GWC2_Deltaproteobacteria_42_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
S_p2_S4_coassembly_k141_3691202_29
unknown

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comp(16623..16793)
DNA (171bp) protein (57aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3691202_30
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16910..17656)
DNA (747bp) protein (249aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380BDC3
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AIF83144.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Displaying items 1-30 of 60 in total

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