ggKbase home page

S_p2_S4_coassembly_k141_645862

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_645862_1
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(1..558)
DNA (558bp) protein (186aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI00036FA607
inner-membrane translocator
Tax=GWF2_Planctomycetes_40_8_curated
S_p2_S4_coassembly_k141_645862_2
unknown

Not on your lists

comp(566..787)
DNA (222bp) protein (74aa)

This feature has no annotations

S_p2_S4_coassembly_k141_645862_3

Not on your lists

comp(797..1348)
DNA (552bp) protein (184aa)
PilT protein domain protein Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CWN0_METMJ
Uncharacterized protein {ECO:0000313|EMBL:KHO50919.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
twitching motility protein PilT
S_p2_S4_coassembly_k141_645862_4
unknown

Not on your lists

comp(1335..1577)
DNA (243bp) protein (81aa)

This feature has no annotations

S_p2_S4_coassembly_k141_645862_5

Not on your lists

comp(1643..2098)
DNA (456bp) protein (152aa)
YbaK/prolyl-tRNA synthetase associated protein Tax=Paenibacillus dendritiformis C454 RepID=H3SGX8_9BACL
Marine sediment metagenome DNA, contig: S03H2_C00413 {ECO:0000313|EMBL:GAH20396.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
YbaK/prolyl-tRNA synthetase associated domain-containing protein
S_p2_S4_coassembly_k141_645862_6
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(2128..3255)
DNA (1128bp) protein (376aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI0003666DF9
Extracellular ligand-binding receptor {ECO:0000313|EMBL:KKT43175.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
extracellular ligand-binding receptor
S_p2_S4_coassembly_k141_645862_7
unknown

Not on your lists

comp(3380..3718)
DNA (339bp) protein (113aa)

This feature has no annotations

S_p2_S4_coassembly_k141_645862_8
unknown

Not on your lists

comp(3720..3959)
DNA (240bp) protein (80aa)

This feature has no annotations

S_p2_S4_coassembly_k141_645862_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

4075..5061
DNA (987bp) protein (329aa)
leucine-responsive regulatory protein 1; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcriptional regulator
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p2_S4_coassembly_k141_645862_10
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(5120..5368)
DNA (249bp) protein (83aa)
Peptidase U32 Tax=uncultured organism RepID=M1PQS3_9ZZZZ
Translation elongation factor-like protein
Tax=CG_Pacearch_04
S_p2_S4_coassembly_k141_645862_11
unknown

Not on your lists

comp(5438..5950)
DNA (513bp) protein (171aa)

This feature has no annotations

S_p2_S4_coassembly_k141_645862_12
unknown

Not on your lists

6193..6897
DNA (705bp) protein (235aa)

This feature has no annotations

S_p2_S4_coassembly_k141_645862_13
GWC2_OD1_53_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7028..7420)
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW34784.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_53_7.;"
id=4010275 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
S_p2_S4_coassembly_k141_645862_14
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

7475..7666
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LLU1_THEBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADT85040.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (strain DSM 11836 / MP).;"
S_p2_S4_coassembly_k141_645862_15
GWC2_OD1_53_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

7877..8722
DNA (846bp) protein (282aa)
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase {ECO:0000313|EMBL:KKW34785.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_53_7.;"
Thymidylate synthase bin=PER_GWC2_41_7 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
S_p2_S4_coassembly_k141_645862_16
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8756..8974
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AP1_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ71051.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
S_p2_S4_coassembly_k141_645862_17
R_OP11_Woesebacteria_44_24b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

8980..9441
DNA (462bp) protein (154aa)
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase bin=PER_GWC2_41_7 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_44_24b_curated
S_p2_S4_coassembly_k141_645862_18
unknown

Not on your lists

comp(9492..10610)
DNA (1119bp) protein (373aa)

This feature has no annotations

S_p2_S4_coassembly_k141_645862_19
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(10698..12440)
DNA (1743bp) protein (581aa)
Probable translation initiation factor IF-2 bin=PER_GWC2_41_7 species=Methanothermus fervidus genus=Methanothermus taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
InfB_2; translation initiation factor IF-2
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p2_S4_coassembly_k141_645862_20
RLO_OD1_Kaiserbacteria_50_10, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12548..13186)
DNA (639bp) protein (213aa)
id=4010251 bin=PER_GWC2_41_7 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Kaiserbacteria_50_10_curated
S_p2_S4_coassembly_k141_645862_21

Not on your lists

comp(13255..13932)
DNA (678bp) protein (226aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Adenylate kinase bin=PER_GWC2_41_7 species=Streptomyces sp. e14 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
adenylate kinase
S_p2_S4_coassembly_k141_645862_22

Not on your lists


comp(14333..14659)
DNA (327bp) protein (109aa)
30S ribosomal protein S10 bin=PER_GWC2_41_7 species=Methanohalobium evestigatum genus=Methanohalobium taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S10
S_p2_S4_coassembly_k141_645862_23
R_RIF_OD1_06_38_12b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

14711..15865
DNA (1155bp) protein (385aa)
Transcriptional regulator, AraC family Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IFT9_9BACL
transcriptional regulator
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12b_curated
S_p2_S4_coassembly_k141_645862_24
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(15961..16440)
DNA (480bp) protein (160aa)
ef1a, tuf; elongation factor 1-alpha (EC:3.6.5.3)
Elongation factor 1-alpha Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=EF1A_METTH
Tax=RBG_16_Micrarchaeota_36_9_curated
Displaying 24 items

View Taxonomy