ggKbase home page

S_p2_S4_coassembly_k141_2440032

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2440032_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

225..917
DNA (693bp) protein (231aa)
short-chain dehydrogenase/reductase SDR bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
short-chain dehydrogenase/reductase SDR
Tax=CSP1_2_Dadabacteria
S_p2_S4_coassembly_k141_2440032_2
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

931..1644
DNA (714bp) protein (238aa)
GTP cyclohydrolase-2 {ECO:0000256|HAMAP-Rule:MF_00179}; EC=3.5.4.25 {ECO:0000256|HAMAP-Rule:MF_00179};; GTP cyclohydrolase II {ECO:0000256|HAMAP-Rule:MF_00179}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-plasma.;"
GTP cyclohydrolase-2 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LNU5_9EURY
GTP cyclohydrolase
S_p2_S4_coassembly_k141_2440032_3
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

1654..2649
DNA (996bp) protein (332aa)
Thioredoxin reductase (trxB-3); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Thioredoxin reductase TrxB-3
Tax=AR6
S_p2_S4_coassembly_k141_2440032_4
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

2934..4298
DNA (1365bp) protein (455aa)
Glutamate-1-semialdehyde 2,1-aminomutase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I960_CALAS bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Glutamate-1-semialdehyde 2,1-aminomutase
Tax=AR20
S_p2_S4_coassembly_k141_2440032_5
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

4295..5467
DNA (1173bp) protein (391aa)
Saccharopine dehydrogenase bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
saccharopine dehydrogenase
Tax=RBG_16_KB1_OP1_55_9_curated
S_p2_S4_coassembly_k141_2440032_6
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

5480..6964
DNA (1485bp) protein (495aa)
hypothetical protein Tax=candidate division YNPFFA RepID=UPI000365F297
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
S_p2_S4_coassembly_k141_2440032_7
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(7618..8808)
DNA (1191bp) protein (397aa)
malate dehydrogenase oxaloacetate-decarboxylating (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate-decarboxylating) bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR10
S_p2_S4_coassembly_k141_2440032_8

Not on your lists

comp(9112..9342)
DNA (231bp) protein (77aa)
Glutaredoxin-like protein, YruB-family bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:KKS82168.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC1_43_10.;"
glutaredoxin-like protein
S_p2_S4_coassembly_k141_2440032_9
R_OD1_Falkowbacteria_42_9, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

9584..9898
DNA (315bp) protein (105aa)
Transglutaminase domain-containing protein bin=GWA1_ZB2_49_26 species=Archaeoglobus veneficus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_42_9_curated
S_p2_S4_coassembly_k141_2440032_10
unknown

Not on your lists

comp(10128..10304)
DNA (177bp) protein (59aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2440032_11

Not on your lists

comp(10314..12542)
DNA (2229bp) protein (743aa)
Cu(2+)-binding/translocating P-type ATPase Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4B5_UNCMA bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKN93527.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Cu(2+)-binding/translocating P-type ATPase
S_p2_S4_coassembly_k141_2440032_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(12547..12936)
DNA (390bp) protein (130aa)
PadR-like protein family transcriptional regulator
PadR-like family transcriptional regulator bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2440032_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(12992..13957)
DNA (966bp) protein (322aa)
UPI00003C8579 related cluster Tax=unknown RepID=UPI00003C8579 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_2440032_14
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13980..14681)
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Methanobacterium formicicum DSM 3637 RepID=K2R371_METFO
Uncharacterized protein {ECO:0000313|EMBL:EKF86998.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum DSM 3637.;"
hypothetical protein
S_p2_S4_coassembly_k141_2440032_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14954..15691)
DNA (738bp) protein (246aa)
Peptidase M56 BlaR1 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=AR11
S_p2_S4_coassembly_k141_2440032_16

Not on your lists

comp(15710..16084)
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51143.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
id=4010373 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
transcriptional regulator, BlaI/MecI/CopY family
S_p2_S4_coassembly_k141_2440032_17
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists

16268..17542
DNA (1275bp) protein (425aa)
id=5049635 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KKT11694.1}; species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
hypothetical protein
S_p2_S4_coassembly_k141_2440032_18
unknown

Not on your lists

17639..17851
DNA (213bp) protein (71aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2440032_19
GWE2_OP11_31_6 , Woesebacteria, Microgenomates, Bacteria

Not on your lists

17867..18310
DNA (444bp) protein (148aa)
id=5087253 bin=GWF1_OP11_31_35_complete species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Uncharacterized protein {ECO:0000313|EMBL:KKP33684.1}; Flags: Fragment;; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE2_31_6.;"
hypothetical protein
Displaying 19 items

View Taxonomy