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S_p2_S4_coassembly_k141_2917412

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2917412_1

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comp(3..455)
DNA (453bp) protein (151aa)
transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {ECO:0000256|HAMAP-Rule:MF_00408}; species="Archaea.;" source="archaeon GW2011_AR5.;"
transcription factor
S_p2_S4_coassembly_k141_2917412_2
AR5, Aenigmarchaeota, DPANN, Archaea

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612..1010
DNA (399bp) protein (133aa)
hypothetical protein bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
Tax=AR5
S_p2_S4_coassembly_k141_2917412_3
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(1012..2013)
DNA (1002bp) protein (334aa)
Putative uncharacterized protein bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
RNA-directed DNA polymerase Reverse transcriptase
Tax=AR5
S_p2_S4_coassembly_k141_2917412_4
unknown

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comp(2542..3402)
DNA (861bp) protein (287aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2917412_5

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3507..4187
DNA (681bp) protein (227aa)
universal metal-binding-domain/4Fe-4S-binding-domain-containing ABC transporter protein bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Universal metal-binding-domain/4Fe-4S-binding-domain-containing ABC transporter protein {ECO:0000313|EMBL:KHO47724.1}; species="Archaea.;" source="archaeon GW2011_AR5.;"
universal metal-binding-domain/4Fe-4S-binding-domain-containing ABC transporter protein
S_p2_S4_coassembly_k141_2917412_6
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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4192..4401
DNA (210bp) protein (70aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p2_S4_coassembly_k141_2917412_7
AR5, Aenigmarchaeota, DPANN, Archaea

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4407..5006
DNA (600bp) protein (200aa)
HhH-GPD family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA-3-methyladenine glycosylase
Tax=AR5
S_p2_S4_coassembly_k141_2917412_8
unknown

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comp(5007..5294)
DNA (288bp) protein (96aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2917412_9

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comp(5324..6148)
DNA (825bp) protein (275aa)
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01963};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; species="Archaea.;" source="archaeon GW2011_AR5.;"
methylthioadenosine phosphorylase (EC:2.4.2.28)
S_p2_S4_coassembly_k141_2917412_10
unknown

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6159..6671
DNA (513bp) protein (171aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2917412_11
unknown

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6737..7069
DNA (333bp) protein (111aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2917412_12
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(7310..7693)
DNA (384bp) protein (128aa)
transmembrane_regions bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
S_p2_S4_coassembly_k141_2917412_13
unknown

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7745..8116
DNA (372bp) protein (124aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2917412_14

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comp(8156..9985)
DNA (1830bp) protein (610aa)
aspartyl-tRNA(Asn) amidotransferase subunit beta; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000256|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000256|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00588};; species="Archaea.;" source="archaeon GW2011_AR5.;"
glutamyl-tRNA(Gln) amidotransferase subunit E
S_p2_S4_coassembly_k141_2917412_15
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9982..10440)
DNA (459bp) protein (153aa)
GCN5-related N-acetyltransferase Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SWU7_CLOC7
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADL51308.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
S_p2_S4_coassembly_k141_2917412_16
CG_Micra_05, Micraarchaeota, Archaea

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comp(10541..11026)
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0Q5_METPS
hypothetical protein
Tax=CG_Micra_05
S_p2_S4_coassembly_k141_2917412_17
CG_Micra_05, Micraarchaeota, Archaea

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comp(11026..11544)
DNA (519bp) protein (173aa)
hypothetical protein
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=CG_Micra_05
S_p2_S4_coassembly_k141_2917412_18
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(11607..12926)
DNA (1320bp) protein (440aa)
glutamyl-tRNA(Gln) amidotransferase subunit D (EC:3.5.1.1); K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
glutamyl-tRNA(Gln) amidotransferase subunit D (EC:3.5.1.1)
Tax=AR5
Displaying 18 items

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