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S_p2_S4_coassembly_k141_861730

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_861730_1
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(214..639)
DNA (426bp) protein (142aa)
PilT protein-like protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FSM9_METHJ
twitching motility protein PilT
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p2_S4_coassembly_k141_861730_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(636..902)
DNA (267bp) protein (89aa)
Hypothetical transcriptional regulator Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=Q6L2A8_PICTO
looped-hinge helix DNA binding domain, AbrB family
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:AIF82360.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
S_p2_S4_coassembly_k141_861730_3

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comp(962..1681)
DNA (720bp) protein (240aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31)
undecaprenyl diphosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Undecaprenyl diphosphate synthase {ECO:0000313|EMBL:AJF60317.1}; EC=2.5.1.31 {ECO:0000313|EMBL:AJF60317.1};; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p2_S4_coassembly_k141_861730_4
CG_Micra_02, Micraarchaeota, Archaea

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comp(1768..2940)
DNA (1173bp) protein (391aa)
geranylgeranyl reductase
geranylgeranyl reductase bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Micra_02
S_p2_S4_coassembly_k141_861730_5
unknown

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3059..3964
DNA (906bp) protein (302aa)

This feature has no annotations

S_p2_S4_coassembly_k141_861730_6
R_WOR_1_46_20, WOR-1, Bacteria

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comp(3976..6111)
DNA (2136bp) protein (712aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K2CW85_9BACT
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
S_p2_S4_coassembly_k141_861730_7

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comp(6182..7174)
DNA (993bp) protein (331aa)
hypothetical protein
MG07298.4; hypothetical protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60307.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p2_S4_coassembly_k141_861730_8
Oidiodendron maius, Oidiodendron, Leotiomycetes, Ascomycota, Fungi

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comp(7418..8620)
DNA (1203bp) protein (401aa)
Putative uncharacterized protein Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2UAA2_SALR5
Glycoside hydrolase family 55 protein {ECO:0000313|EMBL:KIM97025.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Leotiomycetes incertae sedis; Myxotrichaceae; mitosporic Myxotrichaceae; Oidiodendron.;" source="Oidiodendron maius Zn.;"
serine-rich repeat adhesion glycoprotein
S_p2_S4_coassembly_k141_861730_9
unknown

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comp(8627..13060)
DNA (4434bp) protein (1478aa)

This feature has no annotations

S_p2_S4_coassembly_k141_861730_10
unknown

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comp(13462..14070)
DNA (609bp) protein (203aa)

This feature has no annotations

S_p2_S4_coassembly_k141_861730_11
AR10, Diapherotrites, DPANN, Archaea

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comp(14092..15492)
DNA (1401bp) protein (467aa)
hypothetical protein
hypothetical protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_861730_12
R_RIF_OD1_11_46_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(15525..18011)
DNA (2487bp) protein (829aa)
hypothetical protein
Cell wall surface anchor family protein bin=GWF2_Bacteroidetes_35_48 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_46_13_curated
S_p2_S4_coassembly_k141_861730_13
RLO_OD1_Falkowbacteria_45_13, Falkowbacteria, Parcubacteria, Bacteria

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comp(18274..19146)
DNA (873bp) protein (291aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003771BE8
high-affinity iron permease
Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_45_13_curated
S_p2_S4_coassembly_k141_861730_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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19288..19719
DNA (432bp) protein (144aa)
hypothetical protein Tax=Methanothermococcus thermolithotrophicus RepID=UPI00036702B9
putative iron dependent repressor
Tax=RBG_16_Thaumarchaeota_49_8_curated
S_p2_S4_coassembly_k141_861730_trna_1
unknown

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comp(19784..19881)
DNA (98bp)
transferRNA Asp
S_p2_S4_coassembly_k141_861730_15
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(19966..20928)
DNA (963bp) protein (321aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371F088
RNA methylase
Tax=Altiarchaeum hamiconexum
S_p2_S4_coassembly_k141_861730_16
GWC1_WWE3_41_7, WWE3, Bacteria

Not on your lists

comp(20909..21172)
DNA (264bp) protein (88aa)
hypothetical protein Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B76BFF
Uncharacterized protein {ECO:0000313|EMBL:KKS21047.1}; species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC1_41_7.;"
UPF0213 family protein
S_p2_S4_coassembly_k141_861730_17
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(21300..22688)
DNA (1389bp) protein (463aa)
Archaeal ATPase family Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGN7_ACIB4
Archaeal ATPase family {ECO:0000313|EMBL:EDY34566.1}; species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
dexx-box ATPase
S_p2_S4_coassembly_k141_861730_18
unknown

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comp(22916..23197)
DNA (282bp) protein (94aa)

This feature has no annotations

S_p2_S4_coassembly_k141_861730_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(23381..24670)
DNA (1290bp) protein (430aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037249A6
sodium/hydrogen exchanger
Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying 20 items

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