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S_p2_S4_coassembly_k141_2111324

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2111324_1
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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119..478
DNA (360bp) protein (120aa)
Tax=RBG_16_Bathyarchaeota_57_9_curated
S_p2_S4_coassembly_k141_2111324_2
unknown

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535..4104
DNA (3570bp) protein (1190aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2111324_3
AR10, Diapherotrites, DPANN, Archaea

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4288..4530
DNA (243bp) protein (81aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
rpoH; DNA-directed RNA polymerase subunit H; K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2111324_4

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4527..8999
DNA (4473bp) protein (1491aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:AJF60324.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AJF60324.1};; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p2_S4_coassembly_k141_2111324_5
AR10, Diapherotrites, DPANN, Archaea

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9102..10922
DNA (1821bp) protein (607aa)
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2111324_6
AR10, Diapherotrites, DPANN, Archaea

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11139..13757
DNA (2619bp) protein (873aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'; K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2111324_7
AR10, Diapherotrites, DPANN, Archaea

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13770..15011
DNA (1242bp) protein (414aa)
rpoA2; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
rpoA2; DNA-directed RNA polymerase, subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2111324_8
AR10, Diapherotrites, DPANN, Archaea

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15074..15391
DNA (318bp) protein (106aa)
large subunit ribosomal protein L30e
LSU ribosomal protein l30e; K02908 large subunit ribosomal protein L30e bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2111324_9

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15427..15828
DNA (402bp) protein (134aa)
nusA; N utilization substance protein A
nusA; transcription elongation factor NusA-like protein; K02600 N utilization substance protein A bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
N utilization substance protein A {ECO:0000313|EMBL:AJF60330.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p2_S4_coassembly_k141_2111324_10
Caldivirga maquilingensis, Caldivirga, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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15847..17832
DNA (1986bp) protein (662aa)
Ribosomal protein S12/S23 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MB80_CALMQ
30S ribosomal protein S12
Ribosomal protein S12/S23 {ECO:0000313|EMBL:ABW01170.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Caldivirga.;" source="Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307; / IC-167).;"
S_p2_S4_coassembly_k141_2111324_11
AR10, Diapherotrites, DPANN, Archaea

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17838..18461
DNA (624bp) protein (208aa)
small subunit ribosomal protein S7
30S ribosomal protein S5e (S7p); K02992 small subunit ribosomal protein S7 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2111324_12

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18516..22244
DNA (3729bp) protein (1243aa)
Elongation factor 2 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=EF2_METKA
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; species="Archaea.;" source="archaeon GW2011_AR21.;"
FusA; elongation factor EF-2
S_p2_S4_coassembly_k141_2111324_13
unknown

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22323..23618
DNA (1296bp) protein (432aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2111324_14
unknown

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23819..24376
DNA (558bp) protein (186aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2111324_15
R_PER_ii_51_35, PER-ii, Bacteria

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24435..25856
DNA (1422bp) protein (474aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
Amine oxidase bin=GWC2_CP_Nitrospirae-rel_42_7 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RIFCSPHIGHO2_01_FULL_PER_ii_51_35_curated
S_p2_S4_coassembly_k141_2111324_16
GWB1_OP11_45_5_curated, Microgenomates, Bacteria

Not on your lists

comp(25875..27857)
DNA (1983bp) protein (661aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K2CW85_9BACT
Tax=GWB1_OP11_45_5_curated
S_p2_S4_coassembly_k141_2111324_17
Staphylococcus haemolyticus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27985..36405
DNA (8421bp) protein (2807aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI00037D63A4
cell wall surface anchor family protein
Serine-rich adhesin for platelets; Flags: Precursor;; species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus haemolyticus (strain JCSC1435).;"
S_p2_S4_coassembly_k141_2111324_18
unknown

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36468..38381
DNA (1914bp) protein (638aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2111324_19
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

38794..40077
DNA (1284bp) protein (428aa)
elongation factor 1-alpha (EC:2.7.7.4)
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2111324_20

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40295..40651
DNA (357bp) protein (119aa)
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
small subunit ribosomal protein S10
SSU ribosomal protein s10p; K02946 small subunit ribosomal protein S10 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S_p2_S4_coassembly_k141_2111324_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

40727..41146
DNA (420bp) protein (140aa)
hypothetical protein
hypothetical protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2111324_22
unknown

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41186..41425
DNA (240bp) protein (80aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2111324_23
CG_Micra_02, Micraarchaeota, Archaea

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41415..41837
DNA (423bp) protein (141aa)
PilT protein Tax=Thermoplasmatales archaeon E-plasma RepID=T0N1V8_9EURY
PilT protein domain-containing protein
Tax=CG_Micra_02
S_p2_S4_coassembly_k141_2111324_24

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41894..43339
DNA (1446bp) protein (482aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
Displaying 24 items

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