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S_p2_S4_coassembly_k141_514792

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_514792_1
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

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1..264
DNA (264bp) protein (88aa)
Proline--tRNA ligase Tax=Mycoplasma sp. CAG:776 RepID=R7NG67_9MOLU
prolyl-tRNA synthetase, family I
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
S_p2_S4_coassembly_k141_514792_2

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389..1252
DNA (864bp) protein (288aa)
Putative metal-dependent phosphoesterase, PHP family Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LUP7_CLOCD
Uncharacterized protein {ECO:0000313|EMBL:KKN57035.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative metal-dependent phosphoesterase, PHP family
S_p2_S4_coassembly_k141_514792_3
unknown

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1278..1496
DNA (219bp) protein (73aa)

This feature has no annotations

S_p2_S4_coassembly_k141_514792_4
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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1622..2404
DNA (783bp) protein (261aa)
hypothetical protein Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B31E18
CDP-alcohol phosphatidyltransferase family {ECO:0000313|EMBL:KKR79114.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
hypothetical protein
S_p2_S4_coassembly_k141_514792_5
unknown

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2406..2720
DNA (315bp) protein (105aa)

This feature has no annotations

S_p2_S4_coassembly_k141_514792_6
RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(2727..3218)
DNA (492bp) protein (164aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000368546B
putative acetyltransferase
Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated
S_p2_S4_coassembly_k141_514792_7
AR11, Woesearchaeaota, DPANN, Archaea

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comp(3226..4269)
DNA (1044bp) protein (348aa)
Tax=AR11
S_p2_S4_coassembly_k141_514792_8
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4266..5465)
DNA (1200bp) protein (400aa)
Putative glycosyltransferase Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWZ3_METPS
putative glycosyltransferase
Tax=AR11
S_p2_S4_coassembly_k141_514792_9

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5543..6976
DNA (1434bp) protein (478aa)
Polysaccharide biosynthesis protein Tax=Methanobacterium sp. (strain AL-21) RepID=F0T719_METSL
Lipopolysaccharide O-side chain biosynthesis protein {ECO:0000313|EMBL:KHO50276.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
polysaccharide biosynthesis protein
S_p2_S4_coassembly_k141_514792_10

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comp(6981..7910)
DNA (930bp) protein (310aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KHO50273.1}; EC=4.2.1.46 {ECO:0000313|EMBL:KHO50273.1};; species="Archaea.;" source="archaeon GW2011_AR11.;"
NAD-dependent epimerase/dehydratase family protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2V1_CALAS
NAD-dependent epimerase/dehydratase family protein
S_p2_S4_coassembly_k141_514792_11
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(7992..8726)
DNA (735bp) protein (245aa)
gcd1; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Nucleotidyl transferase Tax=Eubacterium sp. CAG:274 RepID=R6PCA3_9FIRM
Nucleotidyl transferase {ECO:0000313|EMBL:KKR79111.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
S_p2_S4_coassembly_k141_514792_12
CG_Omnitr_07, Omnitrophica, Bacteria

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comp(8727..10028)
DNA (1302bp) protein (434aa)
ugd; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
ugd; UDP-glucose 6-dehydrogenase
Tax=CG_Omnitr_07
S_p2_S4_coassembly_k141_514792_13
CG_Woesearch_02, Woesearchaeota, Archaea

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10094..10894
DNA (801bp) protein (267aa)
rfbM; mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Nucleotidyl transferase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_514792_14
unknown

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comp(10957..11496)
DNA (540bp) protein (180aa)

This feature has no annotations

S_p2_S4_coassembly_k141_514792_15
unknown

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12049..12465
DNA (417bp) protein (139aa)

This feature has no annotations

S_p2_S4_coassembly_k141_514792_16
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(12268..13383)
DNA (1116bp) protein (372aa)
Uncharacterized protein Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AIV2_PYRYC
hypothetical protein
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_514792_17
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(13380..13748)
DNA (369bp) protein (123aa)
hypothetical protein; K09143 hypothetical protein bin=bin1_lowGC species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
S_p2_S4_coassembly_k141_514792_18
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13794..14948)
DNA (1155bp) protein (385aa)
aspartate transaminase (EC:2.6.1.1)
L-aspartate aminotransferase apoenzyme bin=GWF2_OP9-related_38_17 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
S_p2_S4_coassembly_k141_514792_19
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14949..15449)
DNA (501bp) protein (167aa)
adenylate kinase (EC:2.7.4.3) bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Adenylate kinase
Tax=AR18
S_p2_S4_coassembly_k141_514792_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15503..15913
DNA (411bp) protein (137aa)
Automatic annotation bin=GWF2_Methylomirabilis_70_14 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_514792_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15900..16373
DNA (474bp) protein (158aa)
transcriptional regulator; K03627 putative transcription factor bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_514792_22

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comp(16374..17762)
DNA (1389bp) protein (463aa)
id=5050185 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO44966.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p2_S4_coassembly_k141_514792_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17749..18450)
DNA (702bp) protein (234aa)
Thioredoxin-like fold bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_514792_24
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18452..19708)
DNA (1257bp) protein (419aa)
putative bi-functional transferase/deacetylase bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Glycosyltransferase involved in cell wall biogenesis
Tax=AR18
S_p2_S4_coassembly_k141_514792_25

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19803..20525
DNA (723bp) protein (241aa)
DNA repair and recombination protein RadB Tax=nanoarchaeote Nst1 RepID=R1G2W9_9ARCH
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; species="Archaea.;" source="archaeon GW2011_AR11.;"
radB; DNA repair and recombination protein RadB
S_p2_S4_coassembly_k141_514792_26
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

20597..22117
DNA (1521bp) protein (507aa)
Carboxyl transferase Tax=Caldicellulosiruptor RepID=B9MRW2_CALBD
carboxyl transferase
Tax=AR11
S_p2_S4_coassembly_k141_514792_27
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

22121..22507
DNA (387bp) protein (129aa)
AccB; biotin carboxyl carrier protein
Biotin/lipoyl attachment domain-containing protein bin=GWF2_WWE1_40_14 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_WWE1_40_14 organism_group=WWE1
Tax=AR11
S_p2_S4_coassembly_k141_514792_28
Methanosarcina sp. 2.H.T.1A.3, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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22689..23732
DNA (1044bp) protein (348aa)
Biotin synthesis BioY protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI17_METAC
Biotin synthase {ECO:0000313|EMBL:KKG18061.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.3.;"
Substrate-specific component BioY of biotin ECF transporter
S_p2_S4_coassembly_k141_514792_29
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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23741..24304
DNA (564bp) protein (188aa)
Cytochrome c biogenesis protein Tax=Legionella longbeachae RepID=D1RKA5_LEGLO
cytochrome C biogenesis protein
Putative cytochrome C biogenesis protein {ECO:0000313|EMBL:CBJ12963.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
Displaying 29 items

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