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S_p2_S4_coassembly_k141_1344837

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_1344837_1

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42..284
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50158.1}; species="Archaea.;" source="archaeon GW2011_AR9.;"
alias=gwa2_scaffold_521_166 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
S_p2_S4_coassembly_k141_1344837_2
AR9, Woesearchaeaota, DPANN, Archaea

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comp(279..704)
DNA (426bp) protein (142aa)
id=5049666 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR9
S_p2_S4_coassembly_k141_1344837_3
AR10, Diapherotrites, DPANN, Archaea

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comp(753..1160)
DNA (408bp) protein (136aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9 2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_1344837_4
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(1165..1668)
DNA (504bp) protein (168aa)
riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase {ECO:0000256|PIRNR:PIRNR015750}; EC=2.5.1.9 {ECO:0000256|PIRNR:PIRNR015750};; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 /; Av18).;"
Riboflavin synthase Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGW6_ARCPA
S_p2_S4_coassembly_k141_1344837_5
R_OP11_Roizmanbacteria_39_9, Roizmannbacteria, Microgenomates, Bacteria

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comp(1672..2244)
DNA (573bp) protein (191aa)
Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_39_9_curated
S_p2_S4_coassembly_k141_1344837_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2241..2621)
DNA (381bp) protein (127aa)
riboflavin/FAD biosynthesis transcriptional regulator (EC:2.7.1.161)
Riboflavin kinase Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I893_METCZ
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S_p2_S4_coassembly_k141_1344837_7
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2662..3117)
DNA (456bp) protein (152aa)
NMD3-related protein (nonsense mediated mRNA decay); K07562 nonsense-mediated mRNA decay protein 3 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_1344837_8
CG_Woesearch_02, Woesearchaeota, Archaea

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3213..3830
DNA (618bp) protein (206aa)
Peptidase S26B, eukaryotic signal peptidase bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_1344837_9
AR11, Woesearchaeaota, DPANN, Archaea

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3862..4179
DNA (318bp) protein (106aa)
DNA-directed RNA polymerase subunit bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transcription-associated protein TFIIS
Tax=AR11
S_p2_S4_coassembly_k141_1344837_10
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4176..4664)
DNA (489bp) protein (163aa)
Putative sensory box histidine kinase/response regulator (EC:2.7.13.3)
hypothetical protein Tax=Thioalkalivibrio sp. AKL17 RepID=UPI00037D84BF
Contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIX12920.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
S_p2_S4_coassembly_k141_1344837_11

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4761..4991
DNA (231bp) protein (77aa)
UPF0235 protein MSWAN_0547 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61052.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
S_p2_S4_coassembly_k141_1344837_12
unknown

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5044..5766
DNA (723bp) protein (241aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1344837_13
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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5813..6445
DNA (633bp) protein (211aa)
dTMP kinase (EC:2.7.4.9)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Putative thymidylate kinase {ECO:0000313|EMBL:KKP27107.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
S_p2_S4_coassembly_k141_1344837_14
unknown

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comp(6455..6742)
DNA (288bp) protein (96aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1344837_15
unknown

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comp(6801..6908)
DNA (108bp) protein (36aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1344837_16
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(6920..7351)
DNA (432bp) protein (144aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase, dUTP pyrophosphatase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase bin=GWB2_Elusimicrobia_63_16 species=Nocardioidaceae bacterium Broad-1 genus=unknown taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_1344837_17
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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comp(7601..8101)
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP27104.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
id=5049186 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
S_p2_S4_coassembly_k141_1344837_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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8267..9217
DNA (951bp) protein (317aa)
Radical SAM protein Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A4W5_THEGJ
tRNA-modifying protein
Tax=RBG_13_Woesearchaeota_36_6_curated
Displaying 18 items

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