ggKbase home page

S_p2_S4_coassembly_k141_2077151

Search features with annotation key words

Displaying items 1-30 of 41 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2077151_1
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(28..552)
DNA (525bp) protein (175aa)
cell division; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Cell division, D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase {ECO:0000313|EMBL:KKP36326.1}; EC=3.1.3.82 {ECO:0000313|EMBL:KKP36326.1};; species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
D,D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-)
S_p2_S4_coassembly_k141_2077151_2
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(558..1523)
DNA (966bp) protein (322aa)
rfaE bifunctional protein bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
PfkB domain protein {ECO:0000313|EMBL:KKR79164.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
PfkB domain-containing protein
S_p2_S4_coassembly_k141_2077151_3
RIFOXYC1_FULL_Bdellovibrionales_37_79_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(1534..2448)
DNA (915bp) protein (305aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZJF3_9BACT
hypothetical protein
Tax=RIFOXYC1_FULL_Bdellovibrionales_37_79_curated
S_p2_S4_coassembly_k141_2077151_4
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(2450..2860)
DNA (411bp) protein (137aa)
Putative nucleotidyltransferase Tax=Synechococcus phage S-SM2 RepID=E3SJ96_9CAUD
Putative nucleotidyltransferase {ECO:0000313|EMBL:ADO97544.1}; species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
nucleotidyl transferase
S_p2_S4_coassembly_k141_2077151_5
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

2979..3731
DNA (753bp) protein (251aa)
mannose-1-phosphate guanylyltransferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Nucleotidyl transferase
Tax=AR4
S_p2_S4_coassembly_k141_2077151_6

Not on your lists

3735..4142
DNA (408bp) protein (136aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C2D4E
Uncharacterized protein {ECO:0000313|EMBL:AJF60860.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
S_p2_S4_coassembly_k141_2077151_7

Not on your lists

comp(4135..4389)
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51380.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
CopG-like DNA-binding bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S_p2_S4_coassembly_k141_2077151_8
unknown

Not on your lists

comp(4500..5309)
DNA (810bp) protein (270aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2077151_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5372..6505)
DNA (1134bp) protein (378aa)
glycosyl transferase family protein; K02843 heptosyltransferase II [EC:2.4.-.-] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glycosyl transferase family protein
Tax=AR11
S_p2_S4_coassembly_k141_2077151_10

Not on your lists

comp(6553..6888)
DNA (336bp) protein (112aa)
hypothetical protein; K09153 hypothetical protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46498.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
S_p2_S4_coassembly_k141_2077151_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(6894..7571)
DNA (678bp) protein (226aa)
family 2 glycosyl transferase bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Glycosyl transferase
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_2077151_12
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(7568..10699)
DNA (3132bp) protein (1044aa)
oligosaccharyl transferase, STT3 subunit; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
oligosaccharyl transferase STT3 subunit
Tax=CG_Woesearch_01
S_p2_S4_coassembly_k141_2077151_13
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(10799..13990)
DNA (3192bp) protein (1064aa)
oligosaccharyl transferase, STT3 subunit; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
oligosaccharyl transferase STT3 subunit
Tax=CG_Woesearch_01
S_p2_S4_coassembly_k141_2077151_14
R_KAZAN_48_13, Kazan, Bacteria

Not on your lists

comp(14135..14803)
DNA (669bp) protein (223aa)
hypothetical protein Tax=Eudoraea adriatica RepID=UPI00035C3764
HAD superfamily hydrolase
Tax=RIFCSPLOWO2_01_FULL_KAZAN_48_13_curated
S_p2_S4_coassembly_k141_2077151_15
Halobacillus halophilus, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14787..15371)
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JJM7_HALH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG44345.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 /; NBRC 102448/ NCIMB 2269) (Sporosarcina halophila).;"
S_p2_S4_coassembly_k141_2077151_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15374..16096)
DNA (723bp) protein (241aa)
group 2 glycosyltransferase (EC:2.4.-.-)
hypothetical protein Tax=Eudoraea adriatica RepID=UPI000376E422
Tax=GWF2_RBX1_38_17_curated
S_p2_S4_coassembly_k141_2077151_17
RLO_OD1_Kaiserbacteria_45_26, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16098..16922)
DNA (825bp) protein (275aa)
hypothetical protein Tax=Eudoraea adriatica RepID=UPI00036A5CAF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Kaiserbacteria_45_26_curated
S_p2_S4_coassembly_k141_2077151_18
RLO_OD1_Kaiserbacteria_45_26, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16928..17836)
DNA (909bp) protein (303aa)
Uncharacterized protein bin=GWD2_RBX1-related_39_127 species=Halobacillus halophilus genus=Halobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Kaiserbacteria_45_26_curated
S_p2_S4_coassembly_k141_2077151_19
Caldicellulosiruptor bescii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17833..18846)
DNA (1014bp) protein (338aa)
Class II aldolase/adducin family protein Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MQ19_CALBD
class II aldolase/adducin family protein
Class II aldolase/adducin family protein {ECO:0000313|EMBL:ACM59811.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320); (Anaerocellum thermophilum).;"
S_p2_S4_coassembly_k141_2077151_20
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(18839..21370)
DNA (2532bp) protein (844aa)
prk; phosphoribulokinase (EC:2.7.1.19)
Uncharacterized protein Tax=uncultured bacterium RepID=K2C0I1_9BACT
Tax=CG_Woesearch_03
S_p2_S4_coassembly_k141_2077151_21

Not on your lists

21495..23336
DNA (1842bp) protein (614aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57848.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
S_p2_S4_coassembly_k141_2077151_22
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(23333..24424)
DNA (1092bp) protein (364aa)
geranylgeranyl reductase bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Geranylgeranyl reductase
Tax=CG_Pacearch_04
S_p2_S4_coassembly_k141_2077151_23
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

24591..26627
DNA (2037bp) protein (679aa)
seg bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
S_p2_S4_coassembly_k141_2077151_24
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

26669..27409
DNA (741bp) protein (247aa)
hypothetical protein Tax=Oceanobacillus kimchii RepID=UPI0003488EEB
hypothetical protein
Tax=RBG_16_Chloroflexi_64_32_curated
S_p2_S4_coassembly_k141_2077151_25
unknown

Not on your lists

27831..28187
DNA (357bp) protein (119aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2077151_26

Not on your lists

comp(28177..28515)
DNA (339bp) protein (113aa)
hypothetical protein; K09005 hypothetical protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46300.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p2_S4_coassembly_k141_2077151_27
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

28703..34105
DNA (5403bp) protein (1801aa)
UPI0003D1B100 related cluster Tax=unknown RepID=UPI0003D1B100
Uncharacterized protein {ECO:0000313|EMBL:ETA67863.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
cell surface protein
S_p2_S4_coassembly_k141_2077151_28
unknown

Not on your lists

comp(34807..34977)
DNA (171bp) protein (57aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2077151_29
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(35071..35505)
DNA (435bp) protein (145aa)
Putative uncharacterized protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_2077151_30
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(35560..36042)
DNA (483bp) protein (161aa)
Putative uncharacterized protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_01
Displaying items 1-30 of 41 in total

View Taxonomy