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Sage2_L_100_16_scaffold_2352

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Sage2_L_100_16_scaffold_2352_1
unknown

Not on your lists

comp(2..67)
DNA (66bp) protein (22aa)

This feature has no annotations

Sage2_L_100_16_scaffold_2352_2
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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668..1162
DNA (495bp) protein (165aa)
Transcriptional regulator, TrmB Tax=Ferroplasma sp. Type II RepID=T0NAB0_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EQB70665.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
Sage2_L_100_16_scaffold_2352_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1355..1741
DNA (387bp) protein (129aa)
hypothetical protein Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037B18B2
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
Sage2_L_100_16_scaffold_2352_4
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1754..2734)
DNA (981bp) protein (327aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
GDP-mannose 4,6-dehydratase Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZN4_METHD
GDP-mannose 4,6-dehydratase
Sage2_L_100_16_scaffold_2352_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(2795..3874)
DNA (1080bp) protein (360aa)
Glycosyl transferase, group 1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B824_METTP
glycosyl transferase, group 1
Tax=RBG_16_Euryarchaeota_68_13_curated
Sage2_L_100_16_scaffold_2352_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3889..4905)
DNA (1017bp) protein (339aa)
Glycosyl transferase, family 2 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CRX3_METMJ
glycosyl transferase family protein
Tax=RBG_16_Euryarchaeota_67_27_curated
Sage2_L_100_16_scaffold_2352_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4991..6100)
DNA (1110bp) protein (370aa)
Glycosyl transferase, group 1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMH4_METH6
glycosyl transferase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Sage2_L_100_16_scaffold_2352_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6114..7811)
DNA (1698bp) protein (566aa)
Membrane protein (Fragment) Tax=mine drainage metagenome RepID=T1C2J4_9ZZZZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
Sage2_L_100_16_scaffold_2352_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7918..8244
DNA (327bp) protein (109aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
Sage2_L_100_16_scaffold_2352_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8241..11549)
DNA (3309bp) protein (1103aa)
DNA polymerase II large subunit (EC:2.7.7.7)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000379A68B
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Sage2_L_100_16_scaffold_2352_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

11686..12024
DNA (339bp) protein (113aa)
Thioredoxin bin=RBG_16_Aminicenantes_63_14 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
thioredoxin
Tax=RBG_16_Euryarchaeota_67_27_curated
Sage2_L_100_16_scaffold_2352_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12094..12960
DNA (867bp) protein (289aa)
RecA-superfamily ATPase possibly involved in signal transduction Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HI08_ACIS0
RecA-superfamily ATPase possibly involved in signal transduction
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Sage2_L_100_16_scaffold_2352_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12962..13657
DNA (696bp) protein (232aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Sage2_L_100_16_scaffold_2352_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13742..18049
DNA (4308bp) protein (1436aa)
Conserved repeat domain protein Tax=Chloroflexus RepID=A9WIM2_CHLAA
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Sage2_L_100_16_scaffold_2352_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(18334..19257)
DNA (924bp) protein (308aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037182C1
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Sage2_L_100_16_scaffold_2352_16
unknown

Not on your lists

comp(19303..19848)
DNA (546bp) protein (182aa)

This feature has no annotations

Sage2_L_100_16_scaffold_2352_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

20019..20552
DNA (534bp) protein (178aa)
Putative Ras family protein Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein
Tax=RBG_16_Euryarchaeota_67_27_curated
Sage2_L_100_16_scaffold_2352_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

20651..21694
DNA (1044bp) protein (348aa)
Amino acid permease-associated region Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQA6_ARCVS
amino acid permease
Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying 18 items

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