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DolZOral124_scaffold_2167

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2167_trna_1
unknown

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107..191
DNA (85bp)
transferRNA
DolZOral124_scaffold_2167_1
unknown

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comp(147..392)
DNA (246bp) protein (82aa)

This feature has no annotations

DolZOral124_scaffold_2167_2
GWC2_OD1_37_14, Magasanikbacteria, Parcubacteria, Bacteria

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comp(355..1503)
DNA (1149bp) protein (383aa)
Nitrate/nitrite transporter Tax=GWC2_OD1_37_14
major facilitator superfamily permease id=5091216 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
ydhC; Inner membrane transport protein YdhC
DolZOral124_scaffold_2167_trna_2
unknown

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1855..1925
DNA (71bp)
transferRNA
DolZOral124_scaffold_2167_3
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1880..2929
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Imtechella halotolerans K1 RepID=I0WBA5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EID73671.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans
cation efflux protein; hypothetical protein
DolZOral124_scaffold_2167_4
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

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2999..3613
DNA (615bp) protein (205aa)
Metal dependent phosphohydrolase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TS25_THETC
putative HD superfamily hydrolase Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
metal dependent phosphohydrolase
DolZOral124_scaffold_2167_5
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

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comp(3624..4211)
DNA (588bp) protein (196aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA06872.1}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
Putative esterase id=3133208 bin=GWC2_TM7_48_9 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
DolZOral124_scaffold_2167_trna_3
unknown

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4236..4318
DNA (83bp)
transferRNA
DolZOral124_scaffold_2167_6
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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comp(4394..5530)
DNA (1137bp) protein (379aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAJ1_9FIRM
cell envelope-related function transcriptional attenuator common domain
Tax=BJP_IG2103_TM7_39_1400
CpsA Natasha Dudek (6/27/16)
DolZOral124_scaffold_2167_7
Amphibacillus xylanus, Amphibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5527..5991)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) RepID=K0J7X5_AMPXN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM48128.1}; TaxID=698758 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Amphibacillus.;" source="Amphibacillus xylanus (strain ATCC 51415 /
VanZ-like domain Natasha Dudek (5/22/16)
DolZOral124_scaffold_2167_8
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(5942..7111)
DNA (1170bp) protein (390aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ADQ15742.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ADQ15742.1};; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Hal
Nucleotide sugar dehydrogenase n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RL01_HALHG
UDP-glucose 6-dehydrogenase Natasha Dudek (5/22/16)
DolZOral124_scaffold_2167_9
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(7334..8314)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000378DE97
hypothetical protein
Cps4I {ECO:0000313|EMBL:AEH57418.1}; Glycosyltransferase {ECO:0000313|EMBL:FAA00849.1}; TaxID=1307 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="S
glycosyltransferase family 14 Natasha Dudek (5/22/16)
DolZOral124_scaffold_2167_10
Clostridium sp. CAG:273, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8445..9923)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:273 RepID=R7L5P5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDE83268.1}; TaxID=1262789 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
Polysaccharide biosynthesis family Natasha Dudek (5/22/16)
DolZOral124_scaffold_2167_11
Corynebacterium variabile, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9920..12013)
DNA (2094bp) protein (698aa)
Putative uncharacterized protein n=1 Tax=Corynebacterium variabile (strain DSM 44702 / JCM 12073 / NCIMB 30131) RepID=G0H9W1_CORVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK35665.1}; TaxID=858619 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium variabile (stra
Nucleotide-diphospho-sugar transferase, glycosyltransferase 2-like, and polysaccharide pyruvyl transferase domains Natasha Dudek (6/27/16)
DolZOral124_scaffold_2167_12
Bacillus amyloliquefaciens, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12010..13095)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium EnGen0021 RepID=L2K2L0_ENTFC
epsG; putative biofilm extracellular matrix formation enzyme EpsG
Membrane protein {ECO:0000313|EMBL:KJD53858.1}; TaxID=1390 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus amyloliquefaciens (Bacillus velezensis).;"
EspG domain Natasha Dudek (6/27/16)
DolZOral124_scaffold_2167_13
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13088..14179)
DNA (1092bp) protein (364aa)
Glycosyl transferase group 1 n=1 Tax=Clostridium sp. CAG:914 RepID=R7M249_9CLOT
Glycosyl transferase group 1 {ECO:0000313|EMBL:CDE95144.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostr
glycosyl transferase group 1 protein
Glycosyltransferase group 1 domain Natasha Dudek (6/27/16)
DolZOral124_scaffold_2167_14
unknown

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comp(14176..14463)
DNA (288bp) protein (96aa)

This feature has no annotations

Unknown Natasha Dudek (6/27/16)
DolZOral124_scaffold_2167_15
Pantoea rodasii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14460..15353)
DNA (894bp) protein (298aa)
glycosyl transferase n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B606D2
Glycosyl transferase {ECO:0000313|EMBL:KHJ67953.1}; TaxID=1076549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea rodasii.;"
putative glycosyltransferase
TupA-like ATP grasp protein Natasha Dudek (6/27/16)
DolZOral124_scaffold_2167_16
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15371..16666)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=5 Tax=Bacillus cereus RepID=R8E5S6_BACCE rbh
Uncharacterized protein {ECO:0000313|EMBL:EOO31378.1}; TaxID=1053170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG1X1-
polysaccharide biosynthesis protein
Confirmed. Natasha Dudek (6/27/16)
DolZOral124_scaffold_2167_17
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16663..17862)
DNA (1200bp) protein (400aa)
O-Antigen Polymerase family n=3 Tax=Streptococcus suis RepID=U3Q7V8_STRSU
O-Antigen Polymerase family
Oligosaccharide repeat unit polymerase {ECO:0000313|EMBL:FAA00827.1}; TaxID=1307 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis.
DolZOral124_scaffold_2167_18
Clostridium sp. CAG:798, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17866..18639)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:798 RepID=R6X5F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD16775.1}; TaxID=1262841 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
glycosyl transferase
DolZOral124_scaffold_2167_19
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(18904..19560)
DNA (657bp) protein (219aa)
Capsular polysaccharide synthesis protein n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp126 RepID=S2R0I0_LACPA
sugar transferase
Tax=BJP_IG2103_TM7_39_1400
Confirmed. Natasha Dudek (6/27/16)
DolZOral124_scaffold_2167_20
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(19526..20674)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JPR0_9FIRM
lipopolysaccharide biosynthesis protein
Tax=BJP_IG2103_TM7_39_1400
Lipopolysaccharide biosynthesis domain Natasha Dudek (6/27/16)
DolZOral124_scaffold_2167_21
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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20870..21424
DNA (555bp) protein (185aa)
LemA-like protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RVE5_9BACT
LemA-like protein
LemA-like protein {ECO:0000313|EMBL:AHB41895.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
LemA Natasha Dudek (6/27/16)
DolZOral124_scaffold_2167_22
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

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21480..22358
DNA (879bp) protein (293aa)
htpX; membrane protease (EC:3.4.24.-)
Protease HtpX homolog id=3133215 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Protease HtpX homolog Tax=GWC2_TM7_48_9
DolZOral124_scaffold_2167_23
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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22370..23509
DNA (1140bp) protein (380aa)
Putative uncharacterized protein id=2442727 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
conserved membrane protein of unknown function Tax=GWC2_TM7_44_17_curated
hypothetical protein
DolZOral124_scaffold_2167_24
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

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23490..25490
DNA (2001bp) protein (667aa)
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2) rbh
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1476577 species="Bacteri
DNA ligase id=2442724 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
DolZOral124_scaffold_2167_25
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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25487..26065
DNA (579bp) protein (193aa)
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=GWC2_TM7_44_17_curated
non-canonical purine NTP pyrophosphatase (EC:3.6.1.15)
Suspect SCG annotation. See neighboring gene [DolZOral124_scaffold_2167_26].
Nucleoside-triphosphatase (NTPase) id=2442714 bin=GWC2_TM7_44_17 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
DolZOral124_scaffold_2167_26
R_RIF_OD1_12_45_17b, RIF-OD1-12, Parcubacteria, Bacteria

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26065..27054
DNA (990bp) protein (330aa)
Ham1 family protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRV3_9BACT id=17255 bin=ACD1 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Ham1 family protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_45_17b_curated
Ham1 family protein
DolZOral124_scaffold_2167_27
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

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27172..27522
DNA (351bp) protein (117aa)
Putative uncharacterized protein id=3133410 bin=GWC2_TM7_48_9 species=Actinosynnema mirum genus=Actinosynnema taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Putative uncharacterized protein Tax=GWC2_TM7_48_9
hypothetical protein
Displaying items 1-30 of 33 in total

View Taxonomy