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scnpilot_expt_750_bf_scaffold_1089

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1089_1
unknown

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comp(2..148)
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1089_2
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(236..754)
DNA (519bp) protein (173aa)
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 id=5226628 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7 rbh
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:AHB42564.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
scnpilot_expt_750_bf_scaffold_1089_3
unknown

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comp(845..1060)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1089_4
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1067..1798)
DNA (732bp) protein (244aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN46107.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
Putative uncharacterized protein id=2750864 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
membrane protein
scnpilot_expt_750_bf_scaffold_1089_5
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

1905..2642
DNA (738bp) protein (246aa)
UPF0246 protein Strop_2927 id=3934426 bin=GWC2_TM7_48_9 species=Salinispora tropica genus=Salinispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW03147.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1089_6
unknown

Not on your lists

comp(2739..3248)
DNA (510bp) protein (170aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1089_7
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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comp(3421..3795)
DNA (375bp) protein (125aa)
rplL; ribosomal protein L12 (BL9) Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
50S ribosomal protein L7/L12 id=2440402 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
50S ribosomal protein L7/L12
scnpilot_expt_750_bf_scaffold_1089_8
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(3867..4391)
DNA (525bp) protein (175aa)
50S ribosomal protein L10 id=2440404 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplJ; 50S ribosomal protein L10 Tax=GWC2_TM7_44_17_curated
50S ribosomal protein L10
scnpilot_expt_750_bf_scaffold_1089_9
unknown

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4740..4916
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1089_10
unknown

Not on your lists

4933..5076
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1089_11
unknown

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5216..5701
DNA (486bp) protein (162aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1089_12
unknown

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5691..6215
DNA (525bp) protein (175aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1089_13

Not on your lists

comp(6212..6934)
DNA (723bp) protein (241aa)
DUTPase {ECO:0000313|EMBL:AIA16531.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
deoxycytidine triphosphate deaminase id=2440633 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
scnpilot_expt_750_bf_scaffold_1089_14
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6951..7637)
DNA (687bp) protein (229aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1263078 species="Bacteria; Firmicutes; Clostri
Thymidylate kinase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GAU6_9FIRM
tmk; thymidylate kinase
scnpilot_expt_750_bf_scaffold_1089_15

Not on your lists

7787..9418
DNA (1632bp) protein (544aa)
putative thymidylate synthase (EC:2.1.1.-)
Thymidylate synthase complementing protein {ECO:0000313|EMBL:AIA16805.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Thymidylate synthase complementing protein ThyX id=2773055 bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
scnpilot_expt_750_bf_scaffold_1089_16
unknown

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9535..10215
DNA (681bp) protein (227aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1089_17

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comp(10271..11272)
DNA (1002bp) protein (334aa)
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Ribosomal protein L1, bacterial and chloroplast form id=4440242 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Ribosomal protein L1
scnpilot_expt_750_bf_scaffold_1089_18
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11371..11877)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RVG4_9BACT
exported protein of unknown function Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1089_19
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

11947..12909
DNA (963bp) protein (321aa)
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_41_12_curated
scnpilot_expt_750_bf_scaffold_1089_20
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

12949..14625
DNA (1677bp) protein (559aa)
putative oxidoreductase Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
Oxidoreductase (Fragment) id=3887356 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Oxidoreductase
scnpilot_expt_750_bf_scaffold_1089_21
RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

14635..15519
DNA (885bp) protein (295aa)
Tax=RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated
scnpilot_expt_750_bf_scaffold_1089_22
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(15588..16544)
DNA (957bp) protein (319aa)
type II secretion system protein G; K02456 general secretion pathway protein G Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
Putative uncharacterized protein id=4525534 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
hypothetical protein
scnpilot_expt_750_bf_scaffold_1089_23
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(16613..17038)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PLZ0_9BACT
rplK; ribosomal protein L11 (BL11)
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus
scnpilot_expt_750_bf_scaffold_1089_24
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(17174..17722)
DNA (549bp) protein (183aa)
nusG; transcription antitermination factor Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
Transcription antitermination protein nusG id=2440640 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Transcription termination/antitermination protein nusG
scnpilot_expt_750_bf_scaffold_1089_25
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(17736..18077)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B21AC
secE; preprotein translocase subunit Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1089_26
candidate division TM7 genomosp. GTL1, Candidatus Saccharibacteria, Bacteria

Not on your lists

18196..19251
DNA (1056bp) protein (352aa)
Glycosyl transferase, family 2 n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRX7_9BACT
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EDK72800.1}; Flags: Precursor;; TaxID=443342 species="Bacteria; Candidatus Saccharibacteria.;" source="candidate division TM7 genomosp. GTL1.;"
Glycosyl transferase, family 2
scnpilot_expt_750_bf_scaffold_1089_27
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

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comp(19226..20854)
DNA (1629bp) protein (543aa)
Putative Multi-sensor signal transduction histidine kinase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PWL5_9BACT rbh
putative Multi-sensor signal transduction histidine kinase Tax=CG_TM7_01
putative Multi-sensor signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_1089_28
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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comp(20899..21528)
DNA (630bp) protein (210aa)
putative zinc protease id=2440648 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
scnpilot_expt_750_bf_scaffold_1089_29
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(21540..22148)
DNA (609bp) protein (203aa)
hypothetical protein
hypothetical protein cdiviTM7_01165 id=5226649 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Tax=BJP_IG2103_TM7_39_1400
scnpilot_expt_750_bf_scaffold_1089_30
unknown

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comp(22191..22772)
DNA (582bp) protein (194aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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