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scnpilot_expt_750_bf_scaffold_517

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_517_1
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(1..123)
DNA (123bp) protein (41aa)
ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:BAL59480.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophic
scnpilot_expt_750_bf_scaffold_517_2
R_RIF_OD1_06_38_12b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(393..665)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LXN5_9PROT
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12b_curated
scnpilot_expt_750_bf_scaffold_517_trna_4
unknown

Not on your lists

comp(873..944)
DNA (72bp)
transferRNA
scnpilot_expt_750_bf_scaffold_517_3
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(976..1821)
DNA (846bp) protein (282aa)
Tax=BJP_IG2103_TM7_39_1400
scnpilot_expt_750_bf_scaffold_517_4
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1852..2394)
DNA (543bp) protein (181aa)
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
Sua5/YciO/YrdC/YwlC id=2444902 bin=GWC2_TM7_44_17 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
scnpilot_expt_750_bf_scaffold_517_5
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(2412..3338)
DNA (927bp) protein (309aa)
mechanosensitive ion channel MscS; K03442 small conductance mechanosensitive channel Tax=GWC2_TM7_44_17_curated
MscS Mechanosensitive ion channel id=2440660 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
hypothetical protein
scnpilot_expt_750_bf_scaffold_517_6
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

3454..4617
DNA (1164bp) protein (388aa)
putative NADH:ubiquinone reductase (H(+)-translocating) (EC:1.6.5.3) Tax=GWC2_TM7_44_17_curated
putative NADH:ubiquinone reductase (H(+)-translocating) (EC:1.6.5.3)
NADH dehydrogenase Ndh id=2440665 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
scnpilot_expt_750_bf_scaffold_517_7
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(4614..5540)
DNA (927bp) protein (309aa)
Mg2 transporter protein CorA family protein id=2445111 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein Tax=GWC2_TM7_44_17_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_517_8
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

5746..6957
DNA (1212bp) protein (404aa)
putative Glycosyl transferase, group 1 family Tax=CG_TM7_01
4-alpha-glucanotransferase id=2440667 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
4-alpha-glucanotransferase
scnpilot_expt_750_bf_scaffold_517_9
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

6954..8183
DNA (1230bp) protein (410aa)
hypothetical protein Tax=CG_TM7_01
alpha-amylase
id=5226657 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
scnpilot_expt_750_bf_scaffold_517_10
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

8176..10119
DNA (1944bp) protein (648aa)
Glycoside hydrolase 15-related protein id=2440674 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
putative Glycoside hydrolase 15-related protein
Tax=BJP_IG2103_TM7_39_1400
scnpilot_expt_750_bf_scaffold_517_11
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

10121..10801
DNA (681bp) protein (227aa)
hypothetical protein
id=5226659 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Uncharacterized protein {ECO:0000313|EMBL:AHB42595.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
scnpilot_expt_750_bf_scaffold_517_12
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(10798..11004)
DNA (207bp) protein (69aa)
hypothetical protein cdiviTM7_01327 id=2440680 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpmG; 50S ribosomal protein L33 2 Tax=GWC2_TM7_44_17_curated
50S ribosomal protein L33
scnpilot_expt_750_bf_scaffold_517_13
unknown

Not on your lists

11224..11487
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_517_trna_3
unknown

Not on your lists

comp(11605..11677)
DNA (73bp)
transferRNA
scnpilot_expt_750_bf_scaffold_517_14
unknown

Not on your lists

comp(11738..12007)
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_517_15
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(12048..13349)
DNA (1302bp) protein (434aa)
putative RNA methyltransferase Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
hypothetical protein cdivTM_11537 id=2439902 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7a genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
hypothetical protein
scnpilot_expt_750_bf_scaffold_517_trna_1
unknown

Not on your lists

13437..13510
DNA (74bp)
transferRNA
scnpilot_expt_750_bf_scaffold_517_trna_2
unknown

Not on your lists

13528..13609
DNA (82bp)
transferRNA
scnpilot_expt_750_bf_scaffold_517_16
unknown

Not on your lists

comp(13651..14049)
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_517_17
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(14066..14713)
DNA (648bp) protein (216aa)
hypothetical protein Tax=CG_TM7_01
hypothetical protein cdivTM7_00881 id=2440878 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
scnpilot_expt_750_bf_scaffold_517_18
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(14724..15557)
DNA (834bp) protein (278aa)
Putative DNA polymerase III, delta' subunit id=2440883 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
scnpilot_expt_750_bf_scaffold_517_19
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(15554..16717)
DNA (1164bp) protein (388aa)
ribosomal large subunit pseudouridine synthase, RluD subfamily protein, partial id=2440889 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
hypothetical protein Tax=GWC2_TM7_44_17_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_517_20
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(16812..17210)
DNA (399bp) protein (133aa)
ribosomal protein S9 id=4440356 bin=GWC2_TM7_48_9 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
ribosomal protein S9 Tax=GWC2_TM7_48_9
ribosomal protein S9
scnpilot_expt_750_bf_scaffold_517_21
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(17212..17655)
DNA (444bp) protein (148aa)
ribosomal protein L13, partial id=4440361 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Ribosomal protein L13, nonfunctional {ECO:0000313|EMBL:KKW05189.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
ribosomal protein L13, nonfunctional
scnpilot_expt_750_bf_scaffold_517_22
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(17655..18092)
DNA (438bp) protein (146aa)
rplQ; 50S ribosomal protein L17
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 id=5226668 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacteriu
scnpilot_expt_750_bf_scaffold_517_23
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(18096..19019)
DNA (924bp) protein (308aa)
rpoA; RNA polymerase (alpha subunit) (EC:2.7.7.6) Tax=GWC2_TM7_44_17_curated
DNA-directed RNA polymerase subunit alpha, partial id=2440932 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
DNA-directed RNA polymerase subunit alpha, nonfunctional
scnpilot_expt_750_bf_scaffold_517_24
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(19039..19656)
DNA (618bp) protein (206aa)
ribosomal protein S4 id=4440371 bin=GWC2_TM7_48_9 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Ribosomal protein S4 {ECO:0000313|EMBL:KKW05192.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
30S ribosomal protein S4
scnpilot_expt_750_bf_scaffold_517_25
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(19660..20055)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PZK7_9BACT
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
scnpilot_expt_750_bf_scaffold_517_26
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(20071..20457)
DNA (387bp) protein (129aa)
30S ribosomal protein S13 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2691
rpsM; ribosomal protein S13 Tax=GWC2_TM7_44_17_curated
30S ribosomal protein S13
Displaying items 1-30 of 65 in total

View Taxonomy