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SCNpilot_expt_300_bf_scaffold_17

Search features with annotation key words

Displaying items 271-300 of 309 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_17_271
unknown

Not on your lists

263924..264202
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_17_272
unknown

Not on your lists

264398..265045
DNA (648bp) protein (216aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_17_273
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(265042..265608)
DNA (567bp) protein (189aa)
putative Prephenate dehydratase (EC:4.2.1.51)
Putative Prephenate dehydratase {ECO:0000313|EMBL:AGL62342.1}; EC=4.2.1.51 {ECO:0000313|EMBL:AGL62342.1};; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" sou
Putative Prephenate dehydratase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PX55_9BACT
SCNpilot_expt_300_bf_scaffold_17_274
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(265955..267799)
DNA (1845bp) protein (615aa)
Beta-lactamase domain protein Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
beta-lactamase
Uncharacterized protein id=3208440 bin=GWC1_CPR2_39_9 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
SCNpilot_expt_300_bf_scaffold_17_275
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

268075..268638
DNA (564bp) protein (188aa)
Adenylate cyclase id=4358330 bin=GWC2_TM7_44_17 species=Nocardiopsis dassonvillei genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
putative Adenylyl cyclase CyaB Tax=GWC2_TM7_44_17_curated
putative Adenylyl cyclase CyaB
SCNpilot_expt_300_bf_scaffold_17_276
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(268603..269496)
DNA (894bp) protein (298aa)
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase id=2445168 bin=GWC2_TM7_44_17 species=Sanguibacter keddieii genus=Sanguibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase Tax=GWC2_TM7_44_17_curated
ubiA; prenyltransferase
SCNpilot_expt_300_bf_scaffold_17_277
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(269496..269804)
DNA (309bp) protein (103aa)
C50 carotenoid epsilon cyclase id=2445162 bin=GWC2_TM7_44_17 species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
crtY2; putative C50 carotenoid epsilon cyclase Tax=GWC2_TM7_44_17_curated
crtY2; putative C50 carotenoid epsilon cyclase
SCNpilot_expt_300_bf_scaffold_17_278
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(269786..270100)
DNA (315bp) protein (105aa)
Lycopene cyclase domain protein id=3133202 bin=GWC2_TM7_48_9 species=Cellulomonas fimi genus=Cellulomonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Lycopene cyclase domain protein {ECO:0000313|EMBL:KKW03593.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
C50 carotenoid epsilon cyclase
SCNpilot_expt_300_bf_scaffold_17_279
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(270100..271578)
DNA (1479bp) protein (493aa)
crtBI; putative bifunctional phytoene synthase/phytoene dehydrogenase (EC:2.5.1.-)
bifunctional enzyme phytoene desaturase/synthetase id=3133200 bin=GWC2_TM7_48_9 species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Bifunctional enzyme phytoene desaturase/synthetase {ECO:0000313|EMBL:KKW03592.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_G
SCNpilot_expt_300_bf_scaffold_17_280
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(271575..272390)
DNA (816bp) protein (272aa)
Squalene/phytoene synthase id=2445145 bin=GWC2_TM7_44_17 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Squalene/phytoene synthase Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
phytoene/squalene synthetase
SCNpilot_expt_300_bf_scaffold_17_281
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(272393..273472)
DNA (1080bp) protein (360aa)
crtE; putative geranylgeranyl pyrophosphate synthase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=GWC2_TM7_44_17_curated
Geranylgeranyl pyrophosphate synthase id=2445140 bin=GWC2_TM7_44_17 species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
geranylgeranyl pyrophosphate synthase
SCNpilot_expt_300_bf_scaffold_17_282
unknown

Not on your lists

273528..273944
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_17_283
unknown

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comp(273991..274581)
DNA (591bp) protein (197aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_17_284
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(274583..275704)
DNA (1122bp) protein (374aa)
ABC-2 type transporter n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RVY5_9BACT rbh
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
SCNpilot_expt_300_bf_scaffold_17_285
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(275704..276456)
DNA (753bp) protein (251aa)
Nodulation ATP-binding protein I
id=5226166 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_17_286
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

276680..276994
DNA (315bp) protein (105aa)
Glutaredoxin-like protein NrdH n=2 Tax=Microbacterium RepID=H8E7A1_9MICO
Glutaredoxin-like protein NrdH {ECO:0000313|EMBL:EIC07092.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans
nrdH; glutaredoxin
SCNpilot_expt_300_bf_scaffold_17_287
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(277194..277472)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PMG5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL62089.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
SCNpilot_expt_300_bf_scaffold_17_288
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(277472..278122)
DNA (651bp) protein (217aa)
hypothetical protein cdivTM7_00309 id=2444875 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_17_289
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(278158..279378)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RWU6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB42104.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
SCNpilot_expt_300_bf_scaffold_17_290
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

279485..280738
DNA (1254bp) protein (418aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8) Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase id=2444892 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7b genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
SCNpilot_expt_300_bf_scaffold_17_291
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(280735..281412)
DNA (678bp) protein (226aa)
NUDIX hydrolase id=4854820 bin=GWC2_TM7_48_9 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
NUDIX hydrolase Tax=GWC2_TM7_48_9
hypothetical protein
SCNpilot_expt_300_bf_scaffold_17_292
unknown

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281500..282771
DNA (1272bp) protein (424aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_17_293
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

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comp(282780..283127)
DNA (348bp) protein (116aa)
exported protein of unknown function Tax=CG_TM7_01
hypothetical protein cdivTM7_00957 id=2444913 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
exported protein of unknown function
SCNpilot_expt_300_bf_scaffold_17_294
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(283127..283660)
DNA (534bp) protein (178aa)
hypothetical protein
hypothetical protein cdivTM_18629, partial id=4854847 bin=GWC2_TM7_48_9 species=candidate division TM7 single-cell isolate TM7a genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_17_295
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(283680..284480)
DNA (801bp) protein (267aa)
Glycosylase id=2444918 bin=GWC2_TM7_44_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
mutY; A/G-specific adenine glycosylase Tax=GWC2_TM7_44_17_curated
mutY; A/G-specific adenine glycosylase
SCNpilot_expt_300_bf_scaffold_17_296
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

284515..285153
DNA (639bp) protein (213aa)
putative Zn-dependent hydrolase Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
hypothetical protein
hypothetical protein id=5226180 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
SCNpilot_expt_300_bf_scaffold_17_297
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

285150..285788
DNA (639bp) protein (213aa)
DNA-3-methyladenine glycosylase Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
DNA-3-methyladenine glycosylase id=3187558 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
HhH-GPD family protein
SCNpilot_expt_300_bf_scaffold_17_298
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(285791..286234)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI0003074076
TM2 domain-contain protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_17_299
unknown

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comp(286256..286669)
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_17_300
R_RIF_OP11_01_43_15b, RIF-OP11-1, Microgenomates, Bacteria

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comp(286674..287987)
DNA (1314bp) protein (438aa)
aspartyl-tRNA synthetase; K09759 nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] Tax=RIFCSPHIGHO2_01_FULL_RIF_OP11_01_43_15b_curated
Aspartyl-tRNA synthetase
id=5226183 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Displaying items 271-300 of 309 in total

View Taxonomy