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SCNpilot_expt_300_bf_scaffold_17_281

Organism: SCNPILOT_EXPT_300_BF_TM7_46_24

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 2
Location: comp(272393..273472)

Top 3 Functional Annotations

Value Algorithm Source
crtE; putative geranylgeranyl pyrophosphate synthase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=GWC2_TM7_44_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 348.0
  • Bit_score: 266
  • Evalue 4.80e-68
Geranylgeranyl pyrophosphate synthase id=2445140 bin=GWC2_TM7_44_17 species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 348.0
  • Bit_score: 266
  • Evalue 3.40e-68
geranylgeranyl pyrophosphate synthase similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 348.0
  • Bit_score: 182
  • Evalue 2.40e-43

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Taxonomy

GWC2_TM7_44_17_curated → Candidatus Saccharibacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGACTCCTGTAGCTTTCGCGACTGATCTTAGGAAAACGAGAGACCTCATCAACGCTCGCCTGGAAGCATATTGTCTCGAGCGCACTGCAGAAGCGGCTAACCATGGTAGCGGCTATGTAACGCTGTGGCACTTTATAACAAAACTTCTGCTTGCGGGTGGTAAAAGGTTTCGACCCTATATTCTACTGACCGTGTACCAGGCCTACGCCAAGGATGGTAATAACGAAACAGTACTTTCTGCAGCACTTGCTCAAGAACTGATTCATTTTGCCATGCTGGTACACGACGACATTATTGATCGTGATTTAACTCGGTATGGTGTACGCAATGTTATGGGACAATACGAAGATTTCTACACTTCGTTTATTGATGACGCATCGGAAAAAACTCATATGGCCCGCAGTGCGGCCATGTTGGCTGGTGATATTTTACTATCTGATGCCTACCGGCTTATGGGTCGGGTCGATGTGTCAAAGCAGCTGGTAGCTGAAGCAACCGAGATTATGTCCCGGGCCGTATTTGAGGTAATTGGCGGCGAATTATTAGACACCGAGGCGGCTTTTATTCAAGACCCGCTCATTAGCGCCAAAAGTATTGCGCTTCATAAAACAGCTAGCTACTCGTTTGTCGGCCCTATTACTATGGGAGCGGTTTTAGCCGGCGCATCAAAAGAAGAGGTTAAAATACTGCAAGCAATAGCCGAACGGCTTGGCGTAGGGTACCAACTACGCGATGACTTATTAGGTGTTTTTGGCAGTGAGGAAAAGACGGGTAAAAGTGTATCTTCGGACATTACCGAAGGAAAGCGCACGTATTTGGTGGAGCAGTTTGAACAGTGTGCTTCGTCCCAGCAGCACGAAGAATTCTTTAAAGTCTTTCACAATATCCACGCTTCGGAACGCGATATTGCTCACGCGCGAAAGTTACTCATCGCCTCTGGTGCTAAGGCGGCCGTAGAAACAGAAATTGCTCATTTGGTGGATGATACTACAGGGCTTATTGAAACACTATGCCTTACGGAAAGCGACAAACAGACCTTCTACGCCTTAGTTGACCACTGCTTACAGAGGGAGGGGTAG
PROTEIN sequence
Length: 360
MTPVAFATDLRKTRDLINARLEAYCLERTAEAANHGSGYVTLWHFITKLLLAGGKRFRPYILLTVYQAYAKDGNNETVLSAALAQELIHFAMLVHDDIIDRDLTRYGVRNVMGQYEDFYTSFIDDASEKTHMARSAAMLAGDILLSDAYRLMGRVDVSKQLVAEATEIMSRAVFEVIGGELLDTEAAFIQDPLISAKSIALHKTASYSFVGPITMGAVLAGASKEEVKILQAIAERLGVGYQLRDDLLGVFGSEEKTGKSVSSDITEGKRTYLVEQFEQCASSQQHEEFFKVFHNIHASERDIAHARKLLIASGAKAAVETEIAHLVDDTTGLIETLCLTESDKQTFYALVDHCLQREG*