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SCNpilot_expt_300_bf_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 194 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_56_1
Bifidobacterium mongoliense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..448)
DNA (447bp) protein (149aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1437603 s
DNA-3-methyladenine glycosylase (EC:3.2.2.21)
DNA-3-methyladenine glycosylase n=1 Tax=Bifidobacterium minimum RepID=UPI0003B3A935
SCNpilot_expt_300_bf_scaffold_56_2
unknown

Not on your lists

479..688
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_56_3
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(788..1291)
DNA (504bp) protein (168aa)
id=2445610 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
id=2445610 Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_300_bf_scaffold_56_4
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(1285..1728)
DNA (444bp) protein (148aa)
Chaperone protein clpB id=2445596 bin=GWC2_TM7_44_17 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=GWC2_TM7_44_17_curated
clpB; ATP-dependent chaperone ClpB
SCNpilot_expt_300_bf_scaffold_56_5
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(1857..2282)
DNA (426bp) protein (142aa)
Heat shock protein Hsp20 family protein id=2445608 bin=GWC2_TM7_44_17 species=Corynebacterium glucuronolyticum genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hsp20; molecular chaperone (small heat shock protein); K13993 HSP20 family protein Tax=GWC2_TM7_44_17_curated
hsp20; molecular chaperone (small heat shock protein)
SCNpilot_expt_300_bf_scaffold_56_6
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(2487..3005)
DNA (519bp) protein (173aa)
glutathionylspermidine synthase (EC:6.3.1.8) id=7201154 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_56_7
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(3255..3569)
DNA (315bp) protein (105aa)
hypothetical protein id=40931 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_56_8
R_RIF_OD1_11_46_22, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3657..4391)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PKU0_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_56_9
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

4721..5179
DNA (459bp) protein (153aa)
id=4854914 bin=GWC2_TM7_48_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW04882.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
SCNpilot_expt_300_bf_scaffold_56_10
unknown

Not on your lists

comp(5163..5879)
DNA (717bp) protein (239aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_56_11
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5956..8469)
DNA (2514bp) protein (838aa)
Type III restriction system endonuclease, putative n=1 Tax=Formosa sp. AK20 RepID=M7MFG7_9FLAO
Type III restriction system endonuclease, putative {ECO:0000313|EMBL:EMQ93806.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source
restriction enzyme
SCNpilot_expt_300_bf_scaffold_56_12
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(8471..9994)
DNA (1524bp) protein (508aa)
hypothetical protein; K00571 site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] Tax=CG_Pacearch_05
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZW05_DESOH rbh
SCNpilot_expt_300_bf_scaffold_56_13
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9987..10673)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WKL0_9ACTN
restriction endonuclease subunit M
Uncharacterized protein {ECO:0000313|EMBL:EGX68955.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei
SCNpilot_expt_300_bf_scaffold_56_14
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

11002..12372
DNA (1371bp) protein (457aa)
ParB domain protein nuclease (Fragment) id=4854923 bin=GWC2_TM7_48_9 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
ParB domain protein nuclease (Fragment) Tax=GWC2_TM7_48_9
DNA modification methylase
SCNpilot_expt_300_bf_scaffold_56_15
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

12341..12952
DNA (612bp) protein (204aa)
id=4854924 bin=GWC2_TM7_48_9 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Tax=GWC2_TM7_48_9
SCNpilot_expt_300_bf_scaffold_56_16
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

13004..13309
DNA (306bp) protein (102aa)
id=4854925 bin=GWC2_TM7_48_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Tax=GWC2_TM7_48_9
SCNpilot_expt_300_bf_scaffold_56_17
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(13299..14219)
DNA (921bp) protein (307aa)
Transporter id=4854926 bin=GWC2_TM7_48_9 species=Corynebacterium jeikeium genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Transporter {ECO:0000313|EMBL:KKW04894.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
Transporter
SCNpilot_expt_300_bf_scaffold_56_18
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

14271..15575
DNA (1305bp) protein (435aa)
Recombinase id=2445667 bin=GWC2_TM7_44_17 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
recombinase Tax=GWC2_TM7_44_17_curated
recombinase
SCNpilot_expt_300_bf_scaffold_56_19
GWE1_OD1_40_20, Parcubacteria, Bacteria

Not on your lists

comp(15583..16536)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IRT8_DESMD
Uncharacterized protein Tax=GWE1_OD1_40_20
hypothetical protein
SCNpilot_expt_300_bf_scaffold_56_20
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(17241..17669)
DNA (429bp) protein (143aa)
SOS-response transcriptional repressor, LexA id=4041147 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_56_21
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(17670..18992)
DNA (1323bp) protein (441aa)
membrane protein of unknown function Tax=CG_TM7_01
hypothetical protein cdivTM_06942 id=4041148 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
membrane protein of unknown function
SCNpilot_expt_300_bf_scaffold_56_22
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

19036..20472
DNA (1437bp) protein (479aa)
Undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) Tax=CG_TM7_01
Undecaprenyl-phosphate galactose phosphotransferase id=4041150 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Undecaprenyl-phosphate galactose phosphotransferase
SCNpilot_expt_300_bf_scaffold_56_23
RHI_Saccharibacteria_42_8, Candidatus Saccharibacteria, Bacteria

Not on your lists

20475..21623
DNA (1149bp) protein (383aa)
Glycosyl transferase, group 1 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_42_8_curated
Glycosyl transferase, group 1 id=4041151 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Glycosyl transferase, group 1
SCNpilot_expt_300_bf_scaffold_56_24
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(21624..23450)
DNA (1827bp) protein (609aa)
glmS; Glucosamine/fructose-6-phosphate aminotransferase, isomerizing (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PMR0_9BACT
SCNpilot_expt_300_bf_scaffold_56_25
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23559..24788)
DNA (1230bp) protein (410aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZG0_METMA
Acyltransferase, putative {ECO:0000313|EMBL:AKB19461.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina
acyltransferase, putative
SCNpilot_expt_300_bf_scaffold_56_26
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(24830..25585)
DNA (756bp) protein (252aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Micromonospora sp. (strain L5) RepID=E8RXA0_MICSL
HAD-superfamily hydrolase; K07024 Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
HAD family hydrolase
SCNpilot_expt_300_bf_scaffold_56_27
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(25589..26638)
DNA (1050bp) protein (350aa)
manC; Mannose-1-phosphate guanylyltransferase (EC:2.7.7.22) Tax=CG_TM7_01
Mannose-1-phosphate guanylyltransferase n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RV62_9BACT rbh
mannose-1-phosphate guanylyltransferase
SCNpilot_expt_300_bf_scaffold_56_28
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

26725..27708
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YUA7_9BACT
glycosyltransferase
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_56_29
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

27671..28078
DNA (408bp) protein (136aa)
Bacterial membrane protein YfhO id=3335044 bin=GWC1_Spirochaetes_27_15 species=Marvinbryantia formatexigens genus=Marvinbryantia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
Bacterial membrane protein YfhO Tax=GWD1_Spirochaetes_27_9_curated
SCNpilot_expt_300_bf_scaffold_56_30
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

28161..28691
DNA (531bp) protein (177aa)
Tax=CG_TM7_01
Displaying items 1-30 of 194 in total

View Taxonomy