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SCNpilot_expt_1000_bf_scaffold_1108

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1108_1
unknown

Not on your lists

3..146
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1108_2
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

133..570
DNA (438bp) protein (146aa)
Putative uncharacterized protein id=4224967 bin=GWC2_TM7_48_9 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
DNA topoisomerase I
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_1000_bf_scaffold_1108_3
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

581..796
DNA (216bp) protein (72aa)
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_1000_bf_scaffold_1108_4
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(793..3282)
DNA (2490bp) protein (830aa)
Putative uncharacterized protein (Fragment) id=4358517 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_1000_bf_scaffold_1108_5
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(3282..3836)
DNA (555bp) protein (185aa)
CHAP domain containing protein id=4358518 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
ssaA2; secretory antigen SsaA
Tax=CG_TM7_01
SCNpilot_expt_1000_bf_scaffold_1108_6
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(3833..5566)
DNA (1734bp) protein (578aa)
Type IV secretory pathway VirB4 components-like protein id=4358519 bin=GWC2_TM7_44_17 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Type IV secretory pathway VirB4 components-like protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_1000_bf_scaffold_1108_7
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(5563..6201)
DNA (639bp) protein (213aa)
Uncharacterized protein id=4358520 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Type IV secretory pathway VirB4 protein
Tax=CG_TM7_01
SCNpilot_expt_1000_bf_scaffold_1108_8
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(6176..6676)
DNA (501bp) protein (167aa)
id=4358521 bin=GWC2_TM7_44_17 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_1000_bf_scaffold_1108_9
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(6673..8196)
DNA (1524bp) protein (508aa)
Putative uncharacterized protein id=4358522 bin=GWC2_TM7_44_17 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=CG_TM7_01
SCNpilot_expt_1000_bf_scaffold_1108_10
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(8207..8551)
DNA (345bp) protein (115aa)
hypothetical protein cdiviTM7_00612 id=4358523 bin=GWC2_TM7_44_17 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
membrane protein of unknown function
Tax=CG_TM7_01
SCNpilot_expt_1000_bf_scaffold_1108_11
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8799..9143)
DNA (345bp) protein (115aa)
Transcriptional regulator, HxlR family n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ED63_RUNSL
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AEI46711.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_expt_1000_bf_scaffold_1108_12
unknown

Not on your lists

9514..9777
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1108_13
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

10152..11309
DNA (1158bp) protein (386aa)
RNA-directed DNA polymerase (reverse transcriptase) (EC:2.7.7.49)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7P1L6_9GAMM
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:KKQ66442.1}; TaxID=1618422 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_38_24.;"
SCNpilot_expt_1000_bf_scaffold_1108_14
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(11274..11660)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003731597
Tax=BJP_IG2102_Elusimicrobia_52_42
SCNpilot_expt_1000_bf_scaffold_1108_15
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11743..12750)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B2S5_TURPD
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_1000_bf_scaffold_1108_16
unknown

Not on your lists

comp(13027..14187)
DNA (1161bp) protein (387aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1108_17
unknown

Not on your lists

comp(14190..15725)
DNA (1536bp) protein (512aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1108_18
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

15910..16242
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RUQ3_9BACT
hypothetical protein
Tax=CG_TM7_01
SCNpilot_expt_1000_bf_scaffold_1108_19
unknown

Not on your lists

16313..16492
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1108_20
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

16489..16698
DNA (210bp) protein (70aa)
id=2439393 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_1000_bf_scaffold_1108_21
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(16905..17723)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSE9_9BACT
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_1000_bf_scaffold_1108_22
unknown

Not on your lists

17932..18108
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1108_23
unknown

Not on your lists

18367..18546
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1108_24
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

18533..20221
DNA (1689bp) protein (563aa)
NUDIX hydrolase id=4684685 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Tax=BJP_IG2103_TM7_39_1400
Displaying 24 items

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