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SCNpilot_cont_500_bf_scaffold_2217

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2217_1
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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comp(2..691)
DNA (690bp) protein (230aa)
ATPase component of ABC transporter with duplicated ATPase domains id=2439673 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_2217_2

Not on your lists

comp(645..1229)
DNA (585bp) protein (195aa)
ATPase component of ABC transporter with duplicated ATPase domains n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B24EA
ABC transporter {ECO:0000313|EMBL:AIA19084.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ABC transporter ATP-binding protein
SCNpilot_cont_500_bf_scaffold_2217_3
unknown

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1367..1906
DNA (540bp) protein (180aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2217_4
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(1978..4104)
DNA (2127bp) protein (709aa)
putative polynucleotide phosphorylase (PNPase) (EC:2.7.7.8 3.1.13.1)
Polyribonucleotide nucleotidyltransferase id=4041796 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2217_5
unknown

Not on your lists

4321..4554
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2217_6
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(4558..4695)
DNA (138bp) protein (46aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
peptidyl-prolyl cis-trans isomerase id=5226518 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
SCNpilot_cont_500_bf_scaffold_2217_7
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(4692..4850)
DNA (159bp) protein (53aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
peptidyl-prolyl cis-trans isomerase id=5226518 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
SCNpilot_cont_500_bf_scaffold_2217_8
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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5015..5461
DNA (447bp) protein (149aa)
mutT/nudix family protein id=4041790 bin=GWC2_TM7_44_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2217_9
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(5458..6252)
DNA (795bp) protein (265aa)
Putative uncharacterized protein id=4041792 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
ABC transporter permease
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2217_10
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(6245..7153)
DNA (909bp) protein (303aa)
ABC transporter related protein id=4041791 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
ABC-type transport system, ATPase component; K09687 antibiotic transport system ATP-binding protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2217_11
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(7194..7460)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 id=4041787 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsO; ribosomal protein S15 (BS18)
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2217_12
unknown

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7559..8059
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2217_13
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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8101..11571
DNA (3471bp) protein (1157aa)
hypothetical protein cdiviTM7_00597 id=2444397 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
membrane protein of unknown function
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2217_14
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11561..12229)
DNA (669bp) protein (223aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.25)
tRNA pseudouridine synthase B id=4041784 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_2217_15
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(12251..14167)
DNA (1917bp) protein (639aa)
id=5226331 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHB42267.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2217_16
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists


14340..14702
DNA (363bp) protein (121aa)
30S ribosomal protein S20 n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RUV1_9BACT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
rpsT; 30S ribosomal protein S20
SCNpilot_cont_500_bf_scaffold_2217_17
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(14748..15650)
DNA (903bp) protein (301aa)
DNA polymerase III subunit delta id=4041779 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_2217_18
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(15669..16535)
DNA (867bp) protein (289aa)
mutM; formamidopyrimidine-DNA glycosidase (EC:3.2.2.23 4.2.99.18) rbh
formamidopyrimidine-DNA glycosylase id=4041691 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2217_19
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(16540..17142)
DNA (603bp) protein (201aa)
hypothetical protein cdivTM_02466 id=4041689 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
exported protein of unknown function
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2217_20
RHI_Saccharibacteria_42_8, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(17174..17755)
DNA (582bp) protein (194aa)
putative (S)-2-haloacid dehalogenase (EC:3.8.1.2)
HAD hydrolase, IA, variant 1 family protein id=4041690 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_42_8_curated
SCNpilot_cont_500_bf_scaffold_2217_21
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(17768..18598)
DNA (831bp) protein (277aa)
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I, partial id=4041687 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_2217_22
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(18567..20267)
DNA (1701bp) protein (567aa)
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I, partial id=4041687 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2217_23
unknown

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comp(20305..21897)
DNA (1593bp) protein (531aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2217_24
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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21991..22566
DNA (576bp) protein (192aa)
Putative Dephospho-CoA kinase-like protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PL51_9BACT
putative Dephospho-CoA kinase-like protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_2217_25
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22563..23537)
DNA (975bp) protein (325aa)
Transcriptional regulator WhiB n=1 Tax=Brevibacterium casei S18 RepID=K9AT50_9MICO
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
WhiB-Stv
SCNpilot_cont_500_bf_scaffold_2217_26
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(23627..24658)
DNA (1032bp) protein (344aa)
RNA polymerase sigma factor RpoD id=4041682 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
sigA; RNA polymerase major sigma-43 factor (sigma-A)
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2217_27
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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comp(24645..26393)
DNA (1749bp) protein (583aa)
DNA primase id=4789669 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
dnaG; DNA primase
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_2217_28
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

26447..27058
DNA (612bp) protein (204aa)
transmembrane_regions id=5226312 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
hypothetical protein
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_2217_29
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(27059..27394)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RVG3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHB42247.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2217_30
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(27404..28624)
DNA (1221bp) protein (407aa)
SH3 type 3 domain-containing protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) id=5226310 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
exported protein of unknown function
Tax=CG_TM7_01
Displaying items 1-30 of 35 in total

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